[HTML][HTML] WGDI: a user-friendly toolkit for evolutionary analyses of whole-genome duplications and ancestral karyotypes
Evidence of whole-genome duplications (WGDs) and subsequent karyotype changes has
been detected in most major lineages of living organisms on Earth. To clarify the complex …
been detected in most major lineages of living organisms on Earth. To clarify the complex …
The evolutionary dynamics of plant duplicate genes
RC Moore, MD Purugganan - Current opinion in plant biology, 2005 - Elsevier
Given the prevalence of duplicate genes and genomes in plant species, the study of their
evolutionary dynamics has been a focus of study in plant evolutionary genetics over the past …
evolutionary dynamics has been a focus of study in plant evolutionary genetics over the past …
Organ and Cell Type–Specific Complementary Expression Patterns and Regulatory Neofunctionalization between Duplicated Genes in Arabidopsis thaliana
Duplicated genes can contribute to the evolution of new functions and they are common in
eukaryotic genomes. After duplication, genes can show divergence in their sequence and/or …
eukaryotic genomes. After duplication, genes can show divergence in their sequence and/or …
Evolution of gene duplication in plants
Ancient duplication events and a high rate of retention of extant pairs of duplicate genes
have contributed to an abundance of duplicate genes in plant genomes. These duplicates …
have contributed to an abundance of duplicate genes in plant genomes. These duplicates …
[HTML][HTML] The evolutionary conundrum of whole‐genome duplication
L Carretero‐Paulet, Y Van de Peer - American journal of botany, 2020 - ncbi.nlm.nih.gov
Whole-genome duplication (WGD) is a dramatic, common event in plants. Because of the
detrimental effects arising from doubling the entire chromosome set, such as minority …
detrimental effects arising from doubling the entire chromosome set, such as minority …
[HTML][HTML] A role for gene duplication and natural variation of gene expression in the evolution of metabolism
DJ Kliebenstein - PloS one, 2008 - journals.plos.org
Background Most eukaryotic genomes have undergone whole genome duplications during
their evolutionary history. Recent studies have shown that the function of these duplicated …
their evolutionary history. Recent studies have shown that the function of these duplicated …
Duplicate genes increase expression diversity in closely related species and allopolyploids
Polyploidy or whole genome duplication (WGD) provides raw genetic materials for
sequence and expression evolution of duplicate genes. However, the mode and tempo of …
sequence and expression evolution of duplicate genes. However, the mode and tempo of …
Evolution of cis-regulatory elements and regulatory networks in duplicated genes of Arabidopsis
AA Arsovski, J Pradinuk, XQ Guo, S Wang… - Plant …, 2015 - academic.oup.com
Plant genomes contain large numbers of duplicated genes that contribute to the evolution of
new functions. Following duplication, genes can exhibit divergence in their coding sequence …
new functions. Following duplication, genes can exhibit divergence in their coding sequence …
[HTML][HTML] Different patterns of gene structure divergence following gene duplication in Arabidopsis
Y Wang, X Tan, AH Paterson - BMC genomics, 2013 - Springer
Background Divergence in gene structure following gene duplication is not well understood.
Gene duplication can occur via whole-genome duplication (WGD) and single-gene …
Gene duplication can occur via whole-genome duplication (WGD) and single-gene …
[HTML][HTML] Functional divergence between subgenomes and gene pairs after whole genome duplications
Z Liang, JC Schnable - Molecular plant, 2018 - cell.com
Gene loss following whole genome duplication (WGD) is often biased, with one subgenome
retaining more ancestral genes and the other sustaining more gene deletions. While bias …
retaining more ancestral genes and the other sustaining more gene deletions. While bias …