The evolution of gene duplicates in angiosperms and the impact of protein–protein interactions and the mechanism of duplication

J Defoort, Y Van de Peer… - Genome biology and …, 2019 - academic.oup.com
Gene duplicates, generated through either whole genome duplication (WGD) or small-scale
duplication (SSD), are prominent in angiosperms and are believed to play an important role …

Evolutionary dynamics and functional specialization of plant paralogs formed by whole and small-scale genome duplications

L Carretero-Paulet, MA Fares - Molecular biology and evolution, 2012 - academic.oup.com
Gene duplicates are a major source of evolutionary novelties in the form of new or
specialized functions and play a key role in speciation. Gene duplicates are generated …

Modes of gene duplication contribute differently to genetic novelty and redundancy, but show parallels across divergent angiosperms

Y Wang, X Wang, H Tang, X Tan, SP Ficklin, FA Feltus… - PloS one, 2011 - journals.plos.org
Background Both single gene and whole genome duplications (WGD) have recurred in
angiosperm evolution. However, the evolutionary effects of different modes of gene …

Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants

X Qiao, Q Li, H Yin, K Qi, L Li, R Wang, S Zhang… - Genome biology, 2019 - Springer
Background The sharp increase of plant genome and transcriptome data provide valuable
resources to investigate evolutionary consequences of gene duplication in a range of taxa …

Evolutionary fates and dynamic functionalization of young duplicate genes in Arabidopsis genomes

J Wang, F Tao, NC Marowsky, C Fan - Plant Physiology, 2016 - academic.oup.com
Gene duplication is a primary means to generate genomic novelties, playing an essential
role in speciation and adaptation. Particularly in plants, a high abundance of duplicate …

Large-scale gene relocations following an ancient genome triplication associated with the diversification of core eudicots

Y Wang, SP Ficklin, X Wang, FA Feltus, AH Paterson - PLoS One, 2016 - journals.plos.org
Different modes of gene duplication including whole-genome duplication (WGD), and
tandem, proximal and dispersed duplications are widespread in angiosperm genomes …

Evolutionary dynamics of duplicated genes in plants

A Lawton-Rauh - Molecular phylogenetics and evolution, 2003 - Elsevier
Gene duplication, arising from region-specific duplication or genome-wide polyploidization,
is a prominent feature in plant genome evolution. Understanding the mechanisms …

Rapid functional divergence after small-scale gene duplication in grasses

X Jiang, R Assis - BMC Evolutionary Biology, 2019 - Springer
Background Gene duplication has played an important role in the evolution and
domestication of flowering plants. Yet little is known about how plant duplicate genes evolve …

Degree of functional divergence in duplicates is associated with distinct roles in plant evolution

A Ezoe, K Shirai, K Hanada - Molecular Biology and Evolution, 2021 - academic.oup.com
Gene duplication is a major mechanism to create new genes. After gene duplication, some
duplicated genes undergo functionalization, whereas others largely maintain redundant …

Both mechanism and age of duplications contribute to biased gene retention patterns in plants

HVS Rody, GJ Baute, LH Rieseberg, LO Oliveira - BMC genomics, 2017 - Springer
Background All extant seed plants are successful paleopolyploids, whose genomes carry
duplicate genes that have survived repeated episodes of diploidization. However, the …