DNA methylation analysis of paediatric low-grade astrocytomas identifies a tumour-specific hypomethylation signature in pilocytic astrocytomas

JN Jeyapalan, GT Doctor, TA Jones… - Acta neuropathologica …, 2016 - Springer
Low-grade gliomas (LGGs) account for about a third of all brain tumours in children. We
conducted a detailed study of DNA methylation and gene expression to improve our …

High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing

E Hodges, AD Smith, J Kendall, Z Xuan, K Ravi… - Genome …, 2009 - genome.cshlp.org
DNA methylation stabilizes developmentally programmed gene expression states. Aberrant
methylation is associated with disease progression and is a common feature of cancer …

Integrative analysis of DNA methylation and gene expression profiles to identify biomarkers of glioblastoma

MR Alivand, S Najafi, S Esmaeili, D Rahmanpour… - Cancer genetics, 2021 - Elsevier
Glioblastoma multiforme (GBM) is the most common, most invasive, and malignant type of
primary brain tumor with poor prognosis and poor survival rate. Using GSE22891 the …

Fundamental differences in promoter CpG island DNA hypermethylation between human cancer and genetically engineered mouse models of cancer

SJ Diede, Z Yao, CC Keyes, AE Tyler, J Dey… - Epigenetics, 2013 - Taylor & Francis
Genetic and epigenetic alterations are essential for the initiation and progression of human
cancer. We previously reported that primary human medulloblastomas showed extensive …

High-throughput methylation profiling by MCA coupled to CpG island microarray

MRH Estécio, PS Yan, AEK Ibrahim, CS Tellez… - Genome …, 2007 - genome.cshlp.org
An abnormal pattern of DNA methylation occurs at specific genes in almost all neoplasms.
The lack of high-throughput methods with high specificity and sensitivity to detect changes in …

Quantitative cross-validation and content analysis of the 450k DNA methylation array from Illumina, Inc.

J Roessler, O Ammerpohl, J Gutwein, B Hasemeier… - BMC research …, 2012 - Springer
Background The newly released 450k DNA methylation array from Illumina, Inc. offers the
possibility to analyze more than 480,000 individual CpG sites in a user friendly standardized …

Distinct methylation profiles of glioma subtypes

K Uhlmann, K Rohde, C Zeller… - … journal of cancer, 2003 - Wiley Online Library
Gliomas are tumors of the central nervous system with a wide spectrum of different tumor
types. They range from pilocytic astrocytoma, with a generally good prognosis, to the …

A microarray-based DNA methylation study of glioblastoma multiforme

R Martinez, JI Martin-Subero, V Rohde, M Kirsch… - Epigenetics, 2009 - Taylor & Francis
Glioblastoma multiforme (GBM) is the most frequent and devastating primary brain tumor in
adults. The presence of epigenetic lesions, like hypermethylation of known tumor …

MethyLight: a high-throughput assay to measure DNA methylation

CA Eads, KD Danenberg, K Kawakami… - Nucleic acids …, 2000 - academic.oup.com
Cytosine-5 DNA methylation occurs in the context of CpG dinucleotides in vertebrates.
Aberrant methylation of CpG islands in human tumors has been shown to cause …

Genome‐wide investigation of intragenic DNA methylation identifies ZMIZ1 gene as a prognostic marker in glioblastoma and multiple cancer types

D Mathios, T Hwang, Y Xia, J Phallen… - … journal of cancer, 2019 - Wiley Online Library
DNA methylation has long been recognized as a tumor‐promoting factor when aberrantly
regulated in the promoter region of genes. However, the effect of intragenic DNA methylation …