MethyLight: a high-throughput assay to measure DNA methylation
CA Eads, KD Danenberg, K Kawakami… - Nucleic acids …, 2000 - academic.oup.com
Cytosine-5 DNA methylation occurs in the context of CpG dinucleotides in vertebrates.
Aberrant methylation of CpG islands in human tumors has been shown to cause …
Aberrant methylation of CpG islands in human tumors has been shown to cause …
A novel real-time PCR assay for quantitative analysis of methylated alleles (QAMA): analysis of the retinoblastoma locus
M Zeschnigk, S Böhringer, EA Price… - Nucleic acids …, 2004 - academic.oup.com
Altered methylation patterns have been found to play a role in developmental disorders,
cancer and aging. Increasingly, changes in DNA methylation are used as molecular markers …
cancer and aging. Increasingly, changes in DNA methylation are used as molecular markers …
Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
Abstract Analysis of DNA methylation patterns relies increasingly on sequencing-based
profiling methods. The four most frequently used sequencing-based technologies are the …
profiling methods. The four most frequently used sequencing-based technologies are the …
[HTML][HTML] Statistical methods for detecting differentially methylated loci and regions
DNA methylation, the reversible addition of methyl groups at CpG dinucleotides, represents
an important regulatory layer associated with gene expression. Changed methylation status …
an important regulatory layer associated with gene expression. Changed methylation status …
Transitioning from genotypes to epigenotypes: why the time has come for medulloblastoma epigenomics
Recent advances in genomic technologies have allowed for tremendous progress in our
understanding of the biology underlying medulloblastoma, a malignant childhood brain …
understanding of the biology underlying medulloblastoma, a malignant childhood brain …
MMASS: an optimized array-based method for assessing CpG island methylation
AEK Ibrahim, NP Thorne, K Baird… - Nucleic acids …, 2006 - academic.oup.com
We describe an optimized microarray method for identifying genome-wide CpG island
methylation called microarray-based methylation assessment of single samples (MMASS) …
methylation called microarray-based methylation assessment of single samples (MMASS) …
Tumour class prediction and discovery by microarray-based DNA methylation analysis
P Adorján, J Distler, E Lipscher, F Model… - Nucleic acids …, 2002 - academic.oup.com
Aberrant DNA methylation of CpG sites is among the earliest and most frequent alterations
in cancer. Several studies suggest that aberrant methylation occurs in a tumour type-specific …
in cancer. Several studies suggest that aberrant methylation occurs in a tumour type-specific …
[HTML][HTML] Methylation Linear Discriminant Analysis (MLDA) for identifying differentially methylated CpG islands
Abstract Background Hypermethylation of promoter CpG islands is strongly correlated to
transcriptional gene silencing and epigenetic maintenance of the silenced state. As well as …
transcriptional gene silencing and epigenetic maintenance of the silenced state. As well as …
DNA methyltransferase-mediated transcriptional silencing in malignant glioma: a combined whole-genome microarray and promoter array analysis
G Foltz, JG Yoon, H Lee, TC Ryken, Z Sibenaller… - Oncogene, 2009 - nature.com
Epigenetic inactivation of tumor suppressor genes is a common feature in human cancer.
Promoter hypermethylation and histone deacetylation are reversible epigenetic mechanisms …
Promoter hypermethylation and histone deacetylation are reversible epigenetic mechanisms …
Genome-scale DNA methylation maps of pluripotent and differentiated cells
DNA methylation is essential for normal development,, and has been implicated in many
pathologies including cancer,. Our knowledge about the genome-wide distribution of DNA …
pathologies including cancer,. Our knowledge about the genome-wide distribution of DNA …