[HTML][HTML] Toward a mechanistic understanding of DNA methylation readout by transcription factors
… , aberrant DNA methylation patterns play a … DNA methylation is transitioning between,
rather than maintaining cellular states. This line of thinking raises the question how methylation …
rather than maintaining cellular states. This line of thinking raises the question how methylation …
Rethinking how DNA methylation patterns are maintained
… can alter gene expression profiles by influencing the binding affinities of transcription factors
or other proteins to DNA; that patterns of DNA methylation exist; and that these patterns vary …
or other proteins to DNA; that patterns of DNA methylation exist; and that these patterns vary …
DNA methylation profiling of transcription factor genes in normal lymphocyte development and lymphomas
C Ivascu, R Wasserkort, R Lesche, J Dong… - The international journal …, 2007 - Elsevier
… 3a), we observed an inverse methylation pattern with both T-cell cell lines being hypermethylated
(>90 percent, data not shown). However, for a number of genes such as c-maf, TCF7, …
(>90 percent, data not shown). However, for a number of genes such as c-maf, TCF7, …
Function and information content of DNA methylation
D Schübeler - Nature, 2015 - nature.com
… of transcriptional states 10,11 . This potential for inheritance coupled with the fact that DNA
methylation patterns … that other transcription factors are more sensitive to DNA methylation, in …
methylation patterns … that other transcription factors are more sensitive to DNA methylation, in …
CpG methylation recruits sequence specific transcription factors essential for tissue specific gene expression
R Chatterjee, C Vinson - Biochimica et Biophysica Acta (BBA)-Gene …, 2012 - Elsevier
… Here we summarize the present understanding of DNA methylation in normal cells and …
Thus, determination of aberrant DNA methylation pattern could be used as an epigenetic …
Thus, determination of aberrant DNA methylation pattern could be used as an epigenetic …
Disclosing the crosstalk among DNA methylation, transcription factors, and histone marks in human pluripotent cells through discovery of DNA methylation motifs
… However, few studies have attempted to predict DNA methylation patterns. DNA methylation
occurs at C 5 cytosine positions, mainly in CpG loci. Some research has focused on CpG …
occurs at C 5 cytosine positions, mainly in CpG loci. Some research has focused on CpG …
DNA methylation: old dog, new tricks?
CG Spruijt, M Vermeulen - Nature structural & molecular biology, 2014 - nature.com
… faithful transfer of DNA methylation patterns during cell … transcription factors. Elife 2,
e00726 (2013). This paper reveals that a large number of transcription factors interact with DNA …
e00726 (2013). This paper reveals that a large number of transcription factors interact with DNA …
DNA methylation patterns formation and function
A Razin, M Szyf - Biochimica et Biophysica Acta (BBA)-Gene Structure …, 1984 - Elsevier
… suggests the association of DNA methylation with gene activity [11-… methylation patterns
during development must be elucidated. In this article the basic features of methylation patterns, …
during development must be elucidated. In this article the basic features of methylation patterns, …
Competition between DNA methylation and transcription factors determines binding of NRF1
… To test if cell-type-specific methylation patterns could similarly explain differential binding
of NRF1, we differentiated ES cells into neuronal progenitors and investigated NRF1 binding. …
of NRF1, we differentiated ES cells into neuronal progenitors and investigated NRF1 binding. …
Genome-wide DNA methylation patterns in CD4+ T cells from patients with systemic lupus erythematosus
… in DNA methylation patterns, we first had to examine the degree of variability in methylation
… We observed differential methylation in a number of transcription factors in lupus CD4 + T …
… We observed differential methylation in a number of transcription factors in lupus CD4 + T …