Transcriptome analysis of the gill of Takifugu rubripes using Illumina sequencing for discovery of SNPs

J Cui, H Wang, S Liu, X Qiu, Z Jiang, X Wang - … and Physiology Part D …, 2014 - Elsevier
… High-throughput sequencing of RNA was developed primarily to analyze global gene …
conducted transcriptome sequencing of the gill samples of Takifugu rubripes analyzed by …

Transcriptome analysis in Takifugu rubripes and Dicentrarchus labrax gills during Cryptocaryon irritans infection

J Cheng, Y Xia, Y Liu, P Liu, Y Liu - Journal of Fish Diseases, 2021 - Wiley Online Library
… Through transcriptome sequencing analysis, we compared the differential pathways and
genes of both T. rubripes and D. labrax and hoped to find the key genes against C. irritans …

Comparative transcriptomic analysis reveals the gene expression profiles in the liver and spleen of Japanese pufferfish (Takifugu rubripes) in response to Vibrio …

H Peng, B Yang, B Li, Z Cai, Q Cui, M Chen… - Fish & Shellfish …, 2019 - Elsevier
… Japanese pufferfish (Takifugu rubripes) is one of the main marine … pufferfish, we performed
a transcriptome analysis of liver and spleen … harveyi at the transcriptome level, promoting our …

Transciptome Analysis of the Gill and Swimbladder of Takifugu rubripes by RNA-Seq

J Cui, S Liu, B Zhang, H Wang, H Sun, S Song, X Qiu… - PLoS …, 2014 - journals.plos.org
… the transcriptome analysis of the gill and swimbladder in T. rubripes by RNA-Seq analysis. …
The transcriptome resources provided, herein, should be valuable for both immune-related …

Comparative RNA-Seq analysis of differentially expressed genes in the testis and ovary of Takifugu rubripes

Z Wang, X Qiu, D Kong, X Zhou, Z Guo, C Gao… - … and Physiology Part D …, 2017 - Elsevier
rubripes has contributed to our understanding of the evolution of teleosts (Van de Peer, …
performed a comparative transcriptome analysis of the testis and ovary in T. rubripes. Annotation …

Transcriptome Analysis Identifies Key Metabolic Changes in the Brain of Takifugu rubripes in Response to Chronic Hypoxia

F Shang, Y Lu, Y Li, B Han, R Wei, S Liu, Y Liu, Y Liu… - Genes, 2022 - mdpi.com
… , the economic yield of Takifugu rubripes is deeply influenced by the oxygen content of
seawater. In this regard, we performed RNA-seq analysis of T. rubripes brains under hypoxia and …

Transcriptomic analysis reveals the genes involved in tetrodotoxin (TTX) accumulation, translocation, and detoxification in the pufferfish Takifugu rubripes

H Zhang, P Li, B Wu, J Hou, J Ren, Y Zhu, J Xu, F Si… - Chemosphere, 2022 - Elsevier
… In this study, transcriptomic analysis was used to identify the … puffer (Takifugu rubripes). A
total of 6101 differentially expressed genes (DEGs) were obtained after transcriptomic analysis; …

[HTML][HTML] Comparative transcriptome profiling and functional analysis in the blood of tiger puffer (Takifugu rubripes) in response to acute hypoxia

Y Lu, Y Li, M Bao, F Shang, R Wei, F Liu, Y Liu… - Aquaculture …, 2023 - Elsevier
… Therefore, based on our results of transcriptome analysis and gene expression, it was
thus clear that acute hypoxia could promote glycolysis to release ATP to maintain the energy …

Transcriptome profiling of tiger pufferfish (Takifugu rubripes) gills in response to acute hypoxia

F Shang, M Bao, F Liu, Z Hu, S Wang, X Yang, Y Yu… - Aquaculture, 2022 - Elsevier
… In recent years, hypoxic stress has become a serious problem in Takifugu rubripes culture
rubripes, we performed a transcriptomic analysis of hypoxic stress in the gills of T. rubripes. …

[HTML][HTML] Gill transcriptomes analysis of Takifugu obscurus, Takifugu rubripes and their hybrid offspring in freshwater and seawater

Y Tian, C Wang, Y Wang, Y Xiong, Y Liu, H Yan… - Aquaculture …, 2024 - Elsevier
… In this study, we used transcriptomic data of the gill from the euryhaline Takifugu obscurus
and the stenohaline Takifugu rubripes, as well as their hybrid offspring (Tor1 and Tor2), to …