… In this paper, we present a major update of ChIP-Atlas involving significant expansion in the
number of experiments by including all public ATAC-seq and WGBS data. The updated web …

… ’ for non-ENCODE) as well as the latest ENCODE ChIP-seq data (n = 1066) have been …
update, we propose a unified integration of all public ChIP-seq datasets producing a unique atlas …

… Here, we introduce ChIP-Atlas 3.0, the latest major update of ChIP-Atlas, which incorporates
a … ChIP-Atlas only covers ChIPseq, ATAC-seq, DNase-seq and whole-genome bisulfite-…

… /Metadata and ftp://ftp.ncbi.nlm.nih.gov/biosample) in order to extract the experimental ID
of updated ChIP-seq and DNA-seq data for the six organisms as shown in Fig. 5.4b. Raw …

… Given that we designed ChIP-Atlas to be updated monthly with semiautomatic pipelines
and systematic curation, the source data will be continuously expanded and may include more …

… In this paper we present an atlas of regulated targets of TFs (ART-TF) in human ES cells by
combining data on TF binding with a large-scale study of the gene expression change after …

… atlas has been updated with the curation, annotation and integration of 2969 quality controlled
ChIP-seq and 208 ChIP… In this update, we propose a unique atlas of regulatory regions for …

… Chromatin immunoprecipitation followed by sequencing, ie ChIP-Seq, is a widely used … ,
ChIP-Atlas and ReMap systematically collect and annotate a large number of ChIP-Seq datasets…

… been updated continually, and users are encouraged to upload their data to the database
as well. As such, in this module, we have been integrating a large amount of RNA sequencing …

… will update HACER immediately if new datasets are reported through the contact page.
Meanwhile, we plan to update HACER semi-annually to match the latest GRO/PRO/CAGE-Seq …