Whole-genome DNA methylation profiling using MethylCap-seq
AB Brinkman, F Simmer, K Ma, A Kaan, J Zhu… - Methods, 2010 - Elsevier
… methylated [1], [2]. This widespread nature poses a challenge for whole-genome profiling of
the DNA methylation … used to reveal whole-genome DNA methylation landscapes in human …
the DNA methylation … used to reveal whole-genome DNA methylation landscapes in human …
[HTML][HTML] Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling
… Finally, we compared EPIC DNA methylation values with matched whole genome bisulphite
… the gold-standard technique for measuring DNA methylation. Again we found a high …
… the gold-standard technique for measuring DNA methylation. Again we found a high …
Genome‐wide DNA methylation profiling
M Bibikova, JB Fan - Wiley Interdisciplinary Reviews: Systems …, 2010 - Wiley Online Library
… While methods described above are effective and can provide information about
methylation states across the whole genome, these platforms require large amounts of …
methylation states across the whole genome, these platforms require large amounts of …
[HTML][HTML] Profiling genome-wide DNA methylation
… methylation profile for a whole genome or targeted regions [82]. The relatively low levels
of 5hmC and the subtraction step demand an increase in the sequencing coverage and the …
of 5hmC and the subtraction step demand an increase in the sequencing coverage and the …
[HTML][HTML] Comparative whole genome DNA methylation profiling across cattle tissues reveals global and tissue-specific methylation patterns
… Full size image We compared the methylation profiles between pairs of samples at a global
CpG level. As expected, the correlations between samples within the same tissue type or …
CpG level. As expected, the correlations between samples within the same tissue type or …
[HTML][HTML] Whole genome DNA methylation: beyond genes silencing
… For instance, by combining single cell genotyping, gene expression and DNA methylation
profiles in a single assay, a research group was able to identify the DNA methylation changes …
profiles in a single assay, a research group was able to identify the DNA methylation changes …
Whole-Genome DNA Methylation Profile of the Jewel Wasp (Nasonia vitripennis)
SM Beeler, GT Wong, JM Zheng… - … : Genes, Genomes …, 2014 - academic.oup.com
… Here, we present the whole-genome DNA methylation profile of Nasonia vitripennis. Our
goal was to provide an additional methylome to those already available from insects, so that the …
goal was to provide an additional methylome to those already available from insects, so that the …
Genome-Wide Dna Methylation Profiling Using Infinium® Assay
M Bibikova, J Le, B Barnes, S Saedinia-Melnyk… - …, 2009 - Taylor & Francis
… As an alternative, bisulfite shotgun sequencing of the entire genome would eliminate this
bias, but currently the approach is relatively expensive and bioinformatically complex. …
bias, but currently the approach is relatively expensive and bioinformatically complex. …
[HTML][HTML] Whole-genome DNA methylation profiling identifies epigenetic signatures of uterine carcinosarcoma
… We have analyzed the epigenetic profile of UCS components in comparison with nontumor
… In conclusion, in this study, we have used next-generation DNA methylation profiling to …
… In conclusion, in this study, we have used next-generation DNA methylation profiling to …
Comparative whole genome DNA methylation profiling of cattle sperm and somatic tissues reveals striking hypomethylated patterns in sperm
… aimed to profile the cattle sperm DNA methylome … DNA methylation profiles using the
whole-genome bisulfite sequencing (WGBS) method. We investigated the landscapes of the DNA …
whole-genome bisulfite sequencing (WGBS) method. We investigated the landscapes of the DNA …
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