Ecological divergence of wild strawberry DNA methylation patterns at distinct spatial scales

H De Kort, B Panis, D Deforce… - Molecular …, 2020 - Wiley Online Library
… We compared DNA methylation patterns between a steep, … -induced changes in DNA
methylation signatures. We find that … the fine spatial scale, while methylation differentiation for most …

Dynamic Changes of DNA Methylation During Wild Strawberry (Fragaria nilgerrensis) Tissue Culture

Q Cao, Y Feng, X Dai, L Huang, J Li, P Tao… - Frontiers in Plant …, 2021 - frontiersin.org
… wide dynamic methylation patterns of strawberry tissue … genomic DNA methylation changes
of a wild strawberry Fragaria … Global methylation levels showed that CG sites exhibited the …

DNA methylation in the wild: epigenetic transgenerational inheritance can mediate adaptation in clones of wild strawberry (Fragaria vesca)

I Sammarco, B Díez Rodríguez, D Galanti… - New …, 2024 - Wiley Online Library
… need to quantify natural DNA methylation variation in plants grown in their natural habitats,
determine the extent of heritability of environmentally induced DNA methylation variation and …

DNA methylation dynamics during stress response in woodland strawberry (Fragaria vesca)

ME López, D Roquis, C Becker, B Denoyes… - Horticulture …, 2022 - academic.oup.com
… of wild strawberry (Fragaria vesca) in response to variable ecologically relevant environmental
conditions at the DNA methylation … genome-wide loss of DNA methylation. Notably, all …

Signatures of polygenic adaptation align with genome‐wide methylation patterns in wild strawberry plants

H De Kort, T Toivainen, F Van Nieuwerburgh… - New …, 2022 - Wiley Online Library
… Our study supports DNA methylation profiles that represent complex quantitative traits
rather than autonomous evolutionary forces. We provide a conceptual framework for polygenic …

The callus formation capacity of strawberry leaf explants is modulated by DNA methylation

D Liu, Q Mu, X Li, S Xu, Y Li, T Gu - Horticulture research, 2022 - academic.oup.com
… To study the correlation between DNA methylation and gene transcript level in strawberry,
we first classified the genes into five groups as silent (FPKM = 0, group 1), expressed at a low …

Integrated transcriptome and methylome analyses reveal the molecular regulation of drought stress in wild strawberry (Fragaria nilgerrensis)

Q Cao, L Huang, J Li, P Qu, P Tao, MJC Crabbe… - BMC plant biology, 2022 - Springer
… In this research, we investigated gene expression profiles and whole genome DNA
methylation of F. nilgerrensis at different time points of drought stress treatment. Through the …

Factor of DNA methylation 1 affects woodland strawberry plant stature and organ size via DNA methylation

G Zheng, S Hu, S Cheng, L Wang, L Kan… - Plant …, 2023 - academic.oup.com
… during fruit ripening in cultivated strawberry, due to reduced … of DNA methylation in regulating
other traits of strawberry. Here, we identified an EMS mutant in the woodland strawberry, …

Integrated transcriptome and DNA methylome analyses reveal the molecular regulation of drought stress in wild strawberry (Fragaria nilgerrensis)

强曹 - 2022 - researchsquare.com
… To further characterize the relationship between DNA methylation and gene expression,
we merged DMGs and DEGs of all the time points and identi ed 835 genes showed both …

Standing covariation between genomic and epigenomic patterns as source for natural selection in wild strawberry plants

H De Kort, T Toivainen, F Van Nieuwerburgh, B Panis… - bioRxiv, 2021 - biorxiv.org
… of DNA sequence variation. Through comparative analyses of genome-wide genetic (SNPs)
and epigenetic (DMCs) variation of wild strawberry … Our study is in favor of DNA methylation