MAPT haplotypestratified GWAS reveals differential association for AD risk variants

SL Strickland, JS Reddy, M Allen… - Alzheimer's & …, 2020 - Wiley Online Library
… Interpretation: We hypothesized that AD risk variants exhibit MAPT haplotype–dependent
association. … analyses, we tested the hypothesis that AD risk variants exhibit MAPT haplotype–…

[HTML][HTML] Genome-wide association study stratified by MAPT haplotypes identifies potential novel loci in Parkinson's disease

K Senkevich, S Bandres-Ciga, A Cisterna-García, E Yu… - MedRxiv, 2023 - ncbi.nlm.nih.gov
… We then studied rare variants in the novel genes that were nominated in the MAPT stratified
GWASs. We performed quality control for whole-genome and whole-exome sequencing …

[HTML][HTML] Genome-wide analysis identifies a novel LINC-PINT splice variant associated with vascular amyloid pathology in Alzheimer's disease

JS Reddy, M Allen, CCG Ho, SR Oatman, Ö İş… - Acta Neuropathologica …, 2021 - Springer
… a genome-wide association study of CAA pathology in AD cases … profiling revealed higher
LINC-PINT expression levels in AD … To fine-map the LINC-PINT locus and explore the putative …

[HTML][HTML] … novel risk loci for Lewy body dementia and the shared genetic etiology with Alzheimer's disease and Parkinson's disease: a large-scale multi-trait association …

P Guo, W Gong, Y Li, L Liu, R Yan, Y Wang, Y Zhang… - BMC medicine, 2022 - Springer
… the largest GWAS summary statistics of LBD, late-onset AD, … LBD-associated genes and
reveal the underlying genetic … exonic variant of MAPT. RegulomeDB scores showed that the …

[引用][C] P2‐141: CHR17Q21 H2 HAPLOTYPE STRATIFIED GWAS REVEALS DIFFERENTIAL ASSOCIATION FOR AD RISK VARIANTS

SL Strickland, JS Reddy, M Allen… - Alzheimer's & …, 2018 - Wiley Online Library
… Chr17q21 (MAPT) haplotype-stratified analyses identified AD risk variants with context-dependent
association. Additional analyses adjusting for APOEε4, epistasis analysis, and gene …

[HTML][HTML] Co-expression network analysis identifies molecular determinants of loneliness associated with neuropsychiatric and neurodegenerative diseases

JA Santiago, JP Quinn, JA Potashkin - International Journal of Molecular …, 2023 - mdpi.com
… Gene ontology revealed that some switch genes from … related to the risk of AD in more than
10 GWAS from diverse populations, … We built a heat cartography map using the clusterphobic …

[HTML][HTML] Epigenomic features related to microglia are associated with attenuated effect of APOE ε4 on Alzheimer's disease risk in humans

Y Ma, L Yu, M Olah, R Smith, SR Oatman… - … Association, 2020 - ncbi.nlm.nih.gov
… Our modeling revealed that each reduction of PC1 in ε4 carriers by 1 unit … a recent
genome-wide association study stratified by the MAPT haplotype identified an AD susceptibility …

Neuronal MAPT expression is mediated by long-range interactions with cis-regulatory elements

BB Rogers, AG Anderson, SN Lauzon, MN Davis… - The American Journal of …, 2024 - cell.com
genome-wide association studies (GWASs) which have identified $83 common variants that
are associated with late-onset ADreveal a depletion of burden of qualifying genetic variants

[HTML][HTML] MAPT expression is mediated by long-range interactions with cis-regulatory elements

BB Rogers, AG Anderson, SN Lauzon, MN Davis… - bioRxiv, 2023 - ncbi.nlm.nih.gov
… common variants that are associated with late-onset AD (LOAD). The majority of GWAS
nominated variants … does not reveal a depletion of burden of qualifying genetic variants in cases. …

In Alzheimer-prone brain regions, metabolism and risk-gene expression are strongly correlated

F Ye, Q Funk, E Rockers, JM Shulman… - Brain …, 2022 - academic.oup.com
… examining the association of genetic variants with risk for … ’s disease patient group (‘AD’)
consisting of participants that … genome-wide association studies (GWAS) indicating that many …