A framework phylogeny of the American oak clade based on sequenced RAD data
Previous phylogenetic studies in oaks (Quercus, Fagaceae) have failed to resolve the
backbone topology of the genus with strong support. Here, we utilize next-generation
sequencing of restriction-site associated DNA (RAD-Seq) to resolve a framework phylogeny
of a predominantly American clade of oaks whose crown age is estimated at 23–33 million
years old. Using a recently developed analytical pipeline for RAD-Seq phylogenetics, we
created a concatenated matrix of 1.40 E06 aligned nucleotides, constituting 27,727 …
backbone topology of the genus with strong support. Here, we utilize next-generation
sequencing of restriction-site associated DNA (RAD-Seq) to resolve a framework phylogeny
of a predominantly American clade of oaks whose crown age is estimated at 23–33 million
years old. Using a recently developed analytical pipeline for RAD-Seq phylogenetics, we
created a concatenated matrix of 1.40 E06 aligned nucleotides, constituting 27,727 …
[PDF][PDF] A Framework Phylogeny of the American Oak Clade Based on Sequenced RAD
Previous phylogenetic studies in oaks (Quercus, Fagaceae) have failed to resolve the
backbone topology of the genus with strong support. Here, we utilize next-generation
sequencing of restriction-site associated DNA (RAD-Seq) to resolve a framework phylogeny
of a predominantly American clade of oaks whose crown age is estimated at 23–33 million
years old. Using a recently developed analytical pipeline for RAD-Seq phylogenetics, we
created a concatenated matrix of 1.40 E06 aligned nucleotides, constituting 27,727 …
backbone topology of the genus with strong support. Here, we utilize next-generation
sequencing of restriction-site associated DNA (RAD-Seq) to resolve a framework phylogeny
of a predominantly American clade of oaks whose crown age is estimated at 23–33 million
years old. Using a recently developed analytical pipeline for RAD-Seq phylogenetics, we
created a concatenated matrix of 1.40 E06 aligned nucleotides, constituting 27,727 …
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