An integrated in silico-in vitro approach for identifying therapeutic targets against osteoarthritis

R Lesage, MN Ferrao Blanco, R Narcisi, T Welting… - Bmc Biology, 2022 - Springer
Bmc Biology, 2022Springer
Background Without the availability of disease-modifying drugs, there is an unmet
therapeutic need for osteoarthritic patients. During osteoarthritis, the homeostasis of articular
chondrocytes is dysregulated and a phenotypical transition called hypertrophy occurs,
leading to cartilage degeneration. Targeting this phenotypic transition has emerged as a
potential therapeutic strategy. Chondrocyte phenotype maintenance and switch are
controlled by an intricate network of intracellular factors, each influenced by a myriad of …
Background
Without the availability of disease-modifying drugs, there is an unmet therapeutic need for osteoarthritic patients. During osteoarthritis, the homeostasis of articular chondrocytes is dysregulated and a phenotypical transition called hypertrophy occurs, leading to cartilage degeneration. Targeting this phenotypic transition has emerged as a potential therapeutic strategy. Chondrocyte phenotype maintenance and switch are controlled by an intricate network of intracellular factors, each influenced by a myriad of feedback mechanisms, making it challenging to intuitively predict treatment outcomes, while in silico modeling can help unravel that complexity. In this study, we aim to develop a virtual articular chondrocyte to guide experiments in order to rationalize the identification of potential drug targets via screening of combination therapies through computational modeling and simulations.
Results
We developed a signal transduction network model using knowledge-based and data-driven (machine learning) modeling technologies. The in silico high-throughput screening of (pairwise) perturbations operated with that network model highlighted conditions potentially affecting the hypertrophic switch. A selection of promising combinations was further tested in a murine cell line and primary human chondrocytes, which notably highlighted a previously unreported synergistic effect between the protein kinase A and the fibroblast growth factor receptor 1.
Conclusions
Here, we provide a virtual articular chondrocyte in the form of a signal transduction interactive knowledge base and of an executable computational model. Our in silico-in vitro strategy opens new routes for developing osteoarthritis targeting therapies by refining the early stages of drug target discovery.
Graphical Abstract
Springer
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