Analysis of LINE-1 expression in human pluripotent cells

M Muñoz-Lopez, M Garcia-Cañadas, A Macia… - Human Embryonic Stem …, 2012 - Springer
M Muñoz-Lopez, M Garcia-Cañadas, A Macia, S Morell, JL Garcia-Perez
Human Embryonic Stem Cells Handbook, 2012Springer
Half of the human genome is composed of repeated DNA, and some types are mobile within
our genome (transposons and retrotransposons). Despite their abundance, only a small
fraction of them are currently active in our genome (Long Interspersed Element-1 (LINE-1),
Alu, and SVA elements). LINE-1 or L1 elements are a family of active non-LTR
retrotransposons, the ongoing mobilization of which still impacts our genome. As selfish
DNA elements, L1 activity is more prominent in early human development, where new …
Abstract
Half of the human genome is composed of repeated DNA, and some types are mobile within our genome (transposons and retrotransposons). Despite their abundance, only a small fraction of them are currently active in our genome (Long Interspersed Element-1 (LINE-1), Alu, and SVA elements). LINE-1 or L1 elements are a family of active non-LTR retrotransposons, the ongoing mobilization of which still impacts our genome. As selfish DNA elements, L1 activity is more prominent in early human development, where new insertions would be transmitted to the progeny. Here, we describe the conventional methods aimed to determine the expression level of LINE-1 elements in pluripotent human cells.
Springer
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