Census of solo LuxR genes in prokaryotic genomes
S Hudaiberdiev, KS Choudhary… - Frontiers in cellular …, 2015 - frontiersin.org
… a survey of solo luxR genes found in complete and draft bacterial genomes in the NCBI
databases using HMMs. We found that 2698 of the 3550 luxR genes found are solos, which is an …
databases using HMMs. We found that 2698 of the 3550 luxR genes found are solos, which is an …
A bioinformatic survey of distribution, conservation, and probable functions of LuxR solo regulators in bacteria
S Subramoni, DV Florez Salcedo… - Frontiers in cellular and …, 2015 - frontiersin.org
… bacterial genomes included in the Interpro database, and differentiated where possible the
putative LuxR solos from LuxR … of genes coding LuxR solos in a bacterial genome ranged …
putative LuxR solos from LuxR … of genes coding LuxR solos in a bacterial genome ranged …
Cell-cell signaling Proteobacterial LuxR solos: a treasure trove of subgroups having different origins, ligands, and ecological roles
… The number of luxR solo genes in a genome or metagenome is often much higher than that
… analysis of LuxR solos in 31,034 currently publicly available proteobacterial genomes and …
… analysis of LuxR solos in 31,034 currently publicly available proteobacterial genomes and …
A walk into the LuxR regulators of Actinobacteria: phylogenomic distribution and functional diversity
CL Santos, M Correia-Neves, P Moradas-Ferreira… - 2012 - journals.plos.org
… to molecules produced by other bacterial species or eukaryotic organisms … solo” or “orphan”
luxR genes, ie, luxR genes not associated with a luxI, and are currently viewed as a bacterial …
luxR genes, ie, luxR genes not associated with a luxI, and are currently viewed as a bacterial …
Computational exploration of putative LuxR Solos in archaea and their functional implications in quorum sensing
… Further, the phylogenetic study indicates that Archaeal LuxR solos (with less substitution …
of horizontal gene transfer. Moreover, Archaea possessing putative LuxR solos, exhibit the …
of horizontal gene transfer. Moreover, Archaea possessing putative LuxR solos, exhibit the …
Phylogenomics and evolutionary perspective of quorum sensing regulators (LuxI/LuxR) in Prokaryotes
… /solos LuxR) and external (solos LuxR) signals. These regulators are reported to evolve
vertically as well as borrowed through horizontal gene … They found that luxR gene transferred …
vertically as well as borrowed through horizontal gene … They found that luxR gene transferred …
In silico Analysis Reveals Distribution of Quorum Sensing Genes and Consistent Presence of LuxR Solos in the Pandoraea Species
… , and functional annotation was performed using NCBI Prokaryotic Genome Annotation …
solo could be missing in the gap of their draft genomes. All canonical LuxR and LuxR solos …
solo could be missing in the gap of their draft genomes. All canonical LuxR and LuxR solos …
Quorum Sensing and LuxR Solos in Photorhabdus
S Brameyer, R Heermann - The molecular biology of Photorhabdus …, 2017 - Springer
… few non-proteobacterial sequenced genomes were also found to carry genes that encode
LuxR-type proteins. The majority of bacteria contain one or more LuxR solos, either with or …
LuxR-type proteins. The majority of bacteria contain one or more LuxR solos, either with or …
In silico analyses of conservational, functional and phylogenetic distribution of the LuxI and LuxR homologs in Gram-positive bacteria
… computational exploration of LuxR solos in Archaea 19 . … the LuxI and LuxR containing
protein with 16s rRNA gene tree, … , EP Census and consensus in bacterial ecosystems: the LuxR-…
protein with 16s rRNA gene tree, … , EP Census and consensus in bacterial ecosystems: the LuxR-…
LuxR solos are becoming major players in cell–cell communication in bacteria
V Venturi, BMM Ahmer - Frontiers in cellular and infection …, 2015 - frontiersin.org
… Several studies and the sequencing of many bacterial genomes has evidenced the presence
of many AHL/QS-related luxR-type genes, which are unpaired to a cognate luxI. These …
of many AHL/QS-related luxR-type genes, which are unpaired to a cognate luxI. These …