… code, factors influencing codon usage or bias, codon usage bias of nuclear and organellar
… determine codon usage and the significance as well as applications of codon usage analysis …

… codon usage patterns, which means that different genomes display a particular global codon
usage … in other words, within a given species the codon usage pattern can (and usually do) …

… effective measure of synonymous codon usage bias, the Codon Adaptation Index, … codon
usage bias (5,6). For many reasons it is desirable to quantify the degree of bias in codon usage …

… Here, we focus on the manner in which selected codon usage bias varies … codon usage
bias might be expected to vary among species dependent on various factors. First, codons are …

… This study addresses two main questions concerning methods to estimate the degree of
codon usage bias. First, when coding regions of different lengths are compared, only the Nc and …

… on DNA evolution and confirm that genes with high codon usage bias have lower rates of …
low codon usage bias. Surprisingly, we find that genes with higher codon usage bias display …

… between recombination rate and codon usage bias (Comeron, … have a minor influence on
codon usage bias. Comeron & … of codon usage bias, with low bias in the middle but high bias …

… studies of codon usage bias where comparisons are made among species with differing
background nucleotide compositions or for studies of codon usage bias in genomic regions that …

… Here, we use bioinformatics approaches to analyze codon usage bias and codon context …
Results show that GAA is the most frequent codon in the dipteran species whereas GAG is …

… features for codon usage bias analyses: (i) it calculates the codon usage bias for one or
more genomes; (ii) it compares and visualizes the correlation between codon usage bias and …