Evidence for Network Evolution in an Arabidopsis Interactome Map

Arabidopsis Interactome Mapping Consortium… - Science, 2011 - science.org
interactome map for Arabidopsis. To generate a map of the Arabidopsis interactome network
an improved high-throughput binary interactome mapping pipeline based on the yeast two-…

[HTML][HTML] Evidence for network evolution in an Arabidopsis interactome map

Arabidopsis Interactome Mapping … - Science (New York …, 2011 - ncbi.nlm.nih.gov
interactome map for Arabidopsis To generate a map of the Arabidopsis interactome network
an improved high-throughput binary interactome mapping pipeline based on the yeast two-…

Evolutionary Rate and Duplicability in the Arabidopsis thaliana Protein–Protein Interaction Network

D Alvarez-Ponce, MA Fares - Genome Biology and Evolution, 2012 - academic.oup.com
… into the evolutionary forces governing their evolution. Indeed, several lines of evidence point
… in metabolic and protein–protein interaction networks (PINs) and the patterns of molecular …

ANAP: an integrated knowledge base for Arabidopsis protein interaction network analysis

C Wang, A Marshall, D Zhang, ZA Wilson - Plant physiology, 2012 - academic.oup.com
… The detailed evidence of the network and each interaction can be saved in various file
formats, … A, Network map based on direct protein interactions and the node relationship of the …

Evidence for network evolution in an arabidopsis interactome map

…, Arabidopsis Interactome Mapping Consortium - Science, 2011 - orbi.uliege.be
… A full account of the complex cellular networks that underlie plant-specific functions is still …
protein-protein interaction map for the interactome network of the plant Arabidopsis thaliana …

[HTML][HTML] The Arabidopsis Kinome: phylogeny and evolutionary insights into functional diversification

M Zulawski, G Schulze, R Braginets, S Hartmann… - BMC genomics, 2014 - Springer
interactome AI1 [25]. In this network, some MAP-kinases, some members of the RLK superfamily
and the AGC-kinase PDK1 (AT5G04510) had a particularly large number of interaction

[HTML][HTML] Protein Interaction Network of Arabidopsis thaliana Female Gametophyte Development Identifies Novel Proteins and Relations

B Hosseinpour, V HajiHoseini, R Kashfi, E Ebrahimie… - PLoS …, 2012 - journals.plos.org
… Regarding the aim of the study on prediction of protein interaction map, we screened genes
… For this claim, we used evidences for verification of predicted protein interactions including …

Interactome evolution: insights from genome-wide analyses of protein–protein interactions

MA Ghadie, J Coulombe-Huntington, Y Xia - Current opinion in structural …, 2018 - Elsevier
… new evolutionary insights enabled by recent genome-wide studies on protein-protein interaction
(PPI) networks (‘interactomes’)… This paper systematically maps the interaction profiles of …

… approach (cluster analysis integration method) to combine expression data and protein–protein interaction networks in agrigenomics: application on arabidopsis …

D Santoni, A Swiercz, A Żmieńko… - Omics: A journal of …, 2014 - liebertpub.com
interaction networks is essentially contained in direct connections between pairs of genes,
providing experimental evidenceInteractome Database (Arabidopsis Interactome Mapping

[HTML][HTML] Integrative Identification of Arabidopsis Mitochondrial Proteome and Its Function Exploitation through Protein Interaction Network

J Cui, J Liu, Y Li, T Shi - PLoS One, 2011 - journals.plos.org
… The situation is similar if we consider GFP image evidence for location, there are 226 of
the CoreMitoP set for which GFP data are available, 150 are in mitochondria, and 73 are …