Expression pattern similarities support the prediction of orthologs retaining common functions after gene duplication events
M Das, G Haberer, A Panda, S Das Laha… - Plant …, 2016 - academic.oup.com
The identification of functionally equivalent, orthologous genes (functional orthologs) across
genomes is necessary for accurate transfer of experimental knowledge from well-
characterized organisms to others. This frequently relies on automated, coding sequence-
based approaches such as OrthoMCL, Inparanoid, and KOG, which usually work well for
one-to-one homologous states. However, this strategy does not reliably work for plants due
to the occurrence of extensive gene/genome duplication. Frequently, for one query gene …
genomes is necessary for accurate transfer of experimental knowledge from well-
characterized organisms to others. This frequently relies on automated, coding sequence-
based approaches such as OrthoMCL, Inparanoid, and KOG, which usually work well for
one-to-one homologous states. However, this strategy does not reliably work for plants due
to the occurrence of extensive gene/genome duplication. Frequently, for one query gene …
Expression pattern similarities support the prediction of orthologs retaining common functions after gene duplication events.
MD Malay Das, G Haberer, AP Arup Panda, SD Laha… - 2016 - cabidigitallibrary.org
The identification of functionally equivalent, orthologous genes (functional orthologs) across
genomes is necessary for accurate transfer of experimental knowledge from well-
characterized organisms to others. This frequently relies on automated, coding sequence-
based approaches such as OrthoMCL, In paranoid, and KOG, which usually work well for
one-to-one homologous states. However, this strategy does not reliably work for plants due
to the occurrence of extensive gene/genome duplication. Frequently, for one query gene …
genomes is necessary for accurate transfer of experimental knowledge from well-
characterized organisms to others. This frequently relies on automated, coding sequence-
based approaches such as OrthoMCL, In paranoid, and KOG, which usually work well for
one-to-one homologous states. However, this strategy does not reliably work for plants due
to the occurrence of extensive gene/genome duplication. Frequently, for one query gene …
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