NAIL, a software toolset for inferring, analyzing and visualizing regulatory networks

DG Hurley, J Cursons, YK Wang, DM Budden… - …, 2015 - academic.oup.com
DG Hurley, J Cursons, YK Wang, DM Budden, CG Print, EJ Crampin
Bioinformatics, 2015academic.oup.com
The wide variety of published approaches for the problem of regulatory network inference
makes using multiple inference algorithms complex and time-consuming. Network Analysis
and Inference Library (NAIL) is a set of software tools to simplify the range of computational
activities involved in regulatory network inference. It uses a modular approach to connect
different network inference algorithms to the same visualization and network-based
analyses. NAIL is technology-independent and includes an interface layer to allow easy …
Abstract
Summary : The wide variety of published approaches for the problem of regulatory network inference makes using multiple inference algorithms complex and time-consuming. Network Analysis and Inference Library (NAIL) is a set of software tools to simplify the range of computational activities involved in regulatory network inference. It uses a modular approach to connect different network inference algorithms to the same visualization and network-based analyses. NAIL is technology-independent and includes an interface layer to allow easy integration of components into other applications.
Availability and implementation : NAIL is implemented in MATLAB, runs on Windows, Linux and OSX, and is available from SourceForge at https://sourceforge.net/projects/nailsystemsbiology/ for all researchers to use.
Contact : daniel.hurley@unimelb.edu.au
Supplementary information : Supplementary data are available at Bioinformatics online.
Oxford University Press
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