LitCovid in 2022: an information resource for the COVID-19 literature
… Topic annotation assigns a set of possible topics (eg Treatment and … in PubMed by their
presence in the LitCovid database. … data collection is freely available to the community. Possible …
presence in the LitCovid database. … data collection is freely available to the community. Possible …
The international nucleotide sequence database collaboration
…, IN Sequence Database Collaboration - … acids research, 2016 - academic.oup.com
… collection of nucleotide sequence data and metadata, and has provided the internationally
recognised system of accession numbers for data … of the INSDC address issues spanning day-…
recognised system of accession numbers for data … of the INSDC address issues spanning day-…
EMBL's European bioinformatics Institute (EMBL-EBI) in 2022
M Thakur, A Bateman, C Brooksbank… - … Acids Research, 2023 - academic.oup.com
… six sites of the European Molecular Biology Laboratory (EMBL), … sustainable, high-quality
data, collected in some cases over … issue, this overview focuses primarily on major changes to …
data, collected in some cases over … issue, this overview focuses primarily on major changes to …
NPASS database update 2023: quantitative natural product activity and species source database for biomedical research
H Zhao, Y Yang, S Wang, X Yang, K Zhou… - … Acids Research, 2023 - academic.oup.com
… The usefulness of these databases can be further enhanced by expanded data coverage of
activity values, species sources, and composition/content values for more variety of NPs and …
activity values, species sources, and composition/content values for more variety of NPs and …
The Sequence Read Archive: explosive growth of sequencing data
… The SRA study contains high-level information including goals of the study and literature
references, and may be linked to the INSDC BioProject database. Similarly, the SRA sample …
references, and may be linked to the INSDC BioProject database. Similarly, the SRA sample …
probeBase: an online resource for rRNA-targeted oligonucleotide probes
… data stored in public databases ( 13 , 14 ) (Strunk,O. and Ludwig,W., 1993–2002, ARB—a
software environment for sequence data, http… researchers in the choice of an appropriate set of …
software environment for sequence data, http… researchers in the choice of an appropriate set of …
CDD/SPARCLE: the conserved domain database in 2020
S Lu, J Wang, F Chitsaz, MK Derbyshire… - … acids research, 2020 - academic.oup.com
… database supports text queries and points to summary information for SDAs as well as links
to other databases, most importantly the NCBI protein collection. … , tools, and data collections …
to other databases, most importantly the NCBI protein collection. … , tools, and data collections …
Defensins knowledgebase: a manually curated database and information source focused on the defensins family of antimicrobial peptides
S Seebah, A Suresh, S Zhuo, YH Choong… - … acids research, 2007 - academic.oup.com
… version of the database holds a comprehensive collection of over 350 individual defensin
records, including 46 experimentally determined 3D structures from the Protein Data Bank (…
records, including 46 experimentally determined 3D structures from the Protein Data Bank (…
BIND—the biomolecular interaction network database
GD Bader, I Donaldson, C Wolting… - … acids research, 2001 - academic.oup.com
… A concerted effort by the biological community is required … a data specification, a database
and associated data mining … Molecular complexes are stored as a set of interactions along …
and associated data mining … Molecular complexes are stored as a set of interactions along …
REBASE—a database for DNA restriction and modification: enzymes, genes and genomes
RJ Roberts, T Vincze, J Posfai… - Nucleic acids research, 2015 - academic.oup.com
… The previous description of REBASE in the 2010 NAR Database Issue (1) described 3945
… data (REBASE LISTS) such as all Type I specificity subunits or the Gold Standard Set are …
… data (REBASE LISTS) such as all Type I specificity subunits or the Gold Standard Set are …