… , simulating and visualizing pathways. Users also have … by querying a database of interactions
aggregated by INDRA. This … The INDRA-IPM map automatically follows the same visual …

… More specifically, INDRA normalizes mechanistic information … The current taxonomy of
INDRA Statements accounts for the … of the INDRA architecture that allows it to tackle the harder …

… the Indra suite of cosmological N-body simulations and the design of its companion
database… We discuss the database design for the particle data, consisting of the positions and …

… ; we show that the qualitative behavior of the INDRA model matches … is used to assemble
and simulate a model from the text “MEK1 … The grounding to the UniProt and HGNC databases …

… middle, ie, qm, is missing (ie, we do not use it in the simulation) for validation of the performance
of the … prediction algorithm were tested with empirical data from the PeMS database. …

… the art cosmological simulations. We are in the process of running the Indra suite of simulations…
2, we describe in some detail the storage scheme designed for the Indra simulations and …

… on-the-fly, from SQL code, inside the database server process. We are currently testing the
prototype with two different scientific data sets: The Indra cosmological simulation will use it to …

… correction methods) were adopted on the database for Policy Decision Making for Future …
simulation in the Chao Phraya River Basin, Thailand, under + 4-K future climate simulation. …

… an agent-based simulation using the major connected ITN … simulation (n = 1000), the
simulated spread was stopped when 90% of the nodes were infected, after which we calculated the …

… representations of structurally diverse compounds using Carcinogenic Potency Database
(CPDB). The molecules confirmed from MD simulations were proceeded for this analysis. …