… of biological systems. Here, we review two aspects of hybrid multi-scale ABMs: linking
individual scale models and efficiently … We demonstrate implementations of existing numerical …

… numerical solution of such dynamic optimization problems for spatially distributed biological
systems. … of systems and the presence of constraints on the optimization problems, impose a …

… As the COPASI simulator is probably the most widely used ODE solver implementation in
the field of systems biology, we considered this the most reliable solution. Additionally, state …

… a number of difficulties, such as the presence of suboptimal solutions, which call for robust
and efficient numerical … The presented methodology can be used for the efficient dynamic …

… For example, the chemical reactions and the corresponding kinetic equations governing
any one biological system are only partially known [3, 4]. Also, finding accurate numerical …

… for biological system modeling; modelers need to implement partial differential equation (PDE)
solvers from scratch to update molecular concentrations by solving PDEs. iDynoMiCS ( …

… between the proposed system and the species population. The second part is dedicated for
presenting the implementation of RKHSM to solve the fractional biological population model …

… the biological process in cancer research. In this review, we firstly studied several typical
mathematical modeling approaches of biological systems … This is the first work to implement the …

… system should be preferred [13]. This allows for the development of more efficient and stable
biological systems. In … [30] demonstrated the implementation of sequential logic in cells with …

… This article considers three types of biological systems: the dengue fever disease … number
of death among the susceptible population. Some of the numerical techniques implemented …