… ChIP-Atlas is powered by comprehensively integrating all data sets from high-throughput
ChIP-seq and DNase-seq, … all the ATAC-seq and whole-genome bisulfite-seq data for six model …

… In the second phase of ChIP-Atlas (ChIP-Atlas 2.0) (2), we integrated tens of thousands
of … chromatin with sequencing (ATACseq) and whole-genome bisulfite sequencing (Bisulfite-seq) …

… Here we used whole-genome bisulfite sequencing from 10 … potential bias due to arbitrary
sequence features or probe affinity … factor binding from ChIP-seq supports mechanistic roles of …

… Here, we used ChIP-BS-seq to examine methylation of the DNA fragments precipitated by
the antibodies to both H3K27me3 and H3K4me3 histone modifications. We showed that, for a …

… For example, HT-TREBS (high-throughput targeted repeat element bisulfite sequencing) …
bisulfite-sequencing coupled with amplification typing of L1 active subfamilies (bs-ATLAS-seq…

… In contrast, bisulfite sequencing-based methods enable a direct measurement of … 1B gives
a brief overview on the general workflow of the most relevant bisulfite sequencing methods …

… We present a human methylome atlas based on deep whole-genome bisulfite sequencing
of 39 sorted, primary cell types and use this dataset to address fundamental questions in …

… methylome atlas, based on deep whole-genome bisulfite sequencing, … Unsupervised
clustering of the atlas recapitulates key … The atlas provides an essential resource for study of gene …

… -cell bisulfite sequencing libraries for DNA methylome profiling. Drop-BS takes advantage
of the ultrahigh throughput offered by droplet microfluidics to prepare bisulfite sequencing …

… of origin, we performed bisulfite conversion reactions after treating … Treatment of R-loops
with RNase A prior to bisulfite … Next, we assessed the contribution of the bisulfite conversion …