Correlation patterns between DNA methylation and gene expression in the cancer genome atlas

JCG Spainhour, HS Lim, SV Yi, P Qiu - Cancer informatics, 2019 - journals.sagepub.com
… association between DNA methylation and gene expression on … that methylation of a single
CpG can affect gene expression … entire gene body to evaluate CpGs’ associations with gene

Aberrant patterns of DNA methylation, chromatin formation and gene expression in cancer

SB Baylin, M Esteller, MR Rountree… - Human molecular …, 2001 - academic.oup.com
… One of the pressing issues in studying promoter DNA methylation in cancer is to understand
how this DNA modification actually modulates gene expression. Central to this concept has …

MethHC: a database of DNA methylation and gene expression in human cancer

WY Huang, SD Hsu, HY Huang, YM Sun… - Nucleic acids …, 2015 - academic.oup.com
DNA methylation and mRNA/microRNA expression … a DNA methylation and gene expression
database in human cancer, MethHC (database of DNA methylation and gene expression in …

Discovering high-resolution patterns of differential DNA methylation that correlate with gene expression changes

ND VanderKraats, JF Hiken, KF Decker… - Nucleic acids …, 2013 - academic.oup.com
… discover DNA methylation changes that associate with gene expression changes, we propose
a new method that uses the entire differential methylation profile in the vicinity of a gene’s …

DNA methylation and the regulation of gene transcription

JT Attwood, RL Yung, BC Richardson - Cellular and Molecular Life …, 2002 - Springer
… A role for DNA methylation in the regulation of MHC gene expression is more
controversial, with evidence both for and against. In the case of the class II trans-activator (CIITA) …

The role of DNA methylation in gene regulation

PA Bommarito, RC Fry - Toxicoepigenetics, 2019 - Elsevier
… effect on gene expression. However, the relationship between DNA methylation and gene
expression is … The relationship between DNA methylation and gene expression has important …

From maternal care to gene expression: DNA methylation and the maternal programming of stress responses

ICG Weaver, M Szyf, MJ Meaney - Endocrine research, 2002 - Taylor & Francis
… with increased expression of the transcription factor NGFI-A and enhanced activation of GR
gene expression through a neuron-specific promoter on exon 1 (exon 1Z) of the GR gene. In …

[HTML][HTML] Genetic analysis of DNA methylation and gene expression levels in whole blood of healthy human subjects

KR van Eijk, S de Jong, MPM Boks, T Langeveld… - BMC genomics, 2012 - Springer
… We investigated the relationship between genetic variation, DNA methylation and gene
expression in a sample of 148 healthy subjects using array-based data derived from whole blood…

Integrative analysis of gene expression, DNA methylation, physiological traits, and genetic variation in human skeletal muscle

DL Taylor, AU Jackson, N Narisu… - Proceedings of the …, 2019 - National Acad Sciences
gene expression and DNA methylation (DNAme) in 265 human skeletal muscle biopsies
from the FUSION study with >7 million genetic … We find hundreds of genes and DNAme sites …

A comparison of gene expression and DNA methylation patterns across tissues and species

LE Blake, J Roux, I Hernando-Herraez… - Genome …, 2020 - genome.cshlp.org
… To comparatively study gene expression levels and DNA methylation patterns in primates,
we collected primary heart, kidney, liver, and lung tissue samples from four human, four …