[HTML][HTML] Comparative analysis of codon usage patterns in chloroplast genomes of five Miscanthus species and related species

J Sheng, X She, X Liu, J Wang, Z Hu - PeerJ, 2021 - peerj.com
Miscanthus is not only a perennial fiber biomass crop, but also valuable breeding resource
for its low-nutrient requirements, photosynthetic efficiency and strong adaptability to …

[HTML][HTML] Codon usage profiling of chloroplast genome in Juglandaceae

Y Zeng, L Shen, S Chen, S Qu, N Hou - Forests, 2023 - mdpi.com
Juglandaceae (walnut) is made up of several economically and ecologically valuable tree
species. Chloroplasts, vitally important for plant growth, are also a rich source of genetic and …

Analysis of codon usage patterns of the chloroplast genomes in the Poaceae family

Y Zhang, X Nie, X Jia, C Zhao, SS Biradar… - Australian Journal of …, 2012 - CSIRO Publishing
Codon usage patterns of 23 Poaceae chloroplast genomes were analysed in this study.
Neutrality analysis indicated that the codon usage patterns have significant correlations with …

[HTML][HTML] Comparative analysis of codon usage patterns in chloroplast genomes of cherries

YF Song, QH Yang, XG Yi, ZQ Zhu, XR Wang, M Li - Forests, 2022 - mdpi.com
Synonymous codon usage bias (SCUB) analysis is an effective method to explore species
specificity, evolutionary relationships and mRNA translation, as well as to discover novel …

Mutation pressure and natural selection on codon usage in chloroplast genes of two species in Pisum L. (Fabaceae: Faboideae)

D Bhattacharyya, A Uddin, S Das… - … DNA Part A, 2019 - Taylor & Francis
This study was attempted to focus on the pattern of codon usage bias (CUB) of chloroplast
genes in two species of Pisum viz. P. fulvum and P. sativum and to identify the factors which …

[HTML][HTML] Comparative analysis of codon usage patterns in chloroplast genomes of ten Epimedium species

Y Wang, D Jiang, K Guo, L Zhao, F Meng, J Xiao… - BMC genomic data, 2023 - Springer
Abstract Background The Phenomenon of codon usage bias exists in the genomes of
prokaryotes and eukaryotes. The codon usage pattern is affected by environmental factors …

[HTML][HTML] Comprehensive Analysis of Codon Usage in Quercus Chloroplast Genome and Focus on psbA Gene

SL Shi, YQ Liu, RX Xia, L Qin - Genes, 2022 - mdpi.com
Quercus (oak) is an important economic and ecological tree species in the world, and it is
the necessary feed for oak silkworm feeding. Chloroplasts play an important role in green …

Analysis of codon usage bias and evolution in the chloroplast genome of Mesona chinensis Benth

D Tang, F Wei, Z Cai, Y Wei, A Khan, J Miao… - Development Genes and …, 2021 - Springer
Mesona chinensis Benth (MCB) is one of the main economic crops in tropical and
subtropical areas. To understand the codon usage bias (CUB) in M. chinensis Benth …

Codon usage pattern and genetic diversity in chloroplast genomes of Panicum species

G Li, L Zhang, P Xue - Gene, 2021 - Elsevier
Exploring the molecular identities and the genetic diversity of a plant species is crucial in
figuring out the evolutionary pressure of genes as well as in molecular breeding application …

[HTML][HTML] Comparative Analysis of Codon Usage Patterns in Nuclear and Chloroplast Genome of Dalbergia (Fabaceae)

ZK Wang, Y Liu, HY Zheng, MQ Tang, SQ Xie - Genes, 2023 - mdpi.com
The Dalbergia plants are widely distributed across more than 130 tropical and subtropical
countries and have significant economic and medicinal value. Codon usage bias (CUB) is a …