Characterization and comparison of chloroplast genomes from two sympatric Hippophae species (Elaeagnaceae)

L Wang, J Wang, C He, J Zhang, Y Zeng - Journal of Forestry Research, 2021 - Springer
The genus Hippophae includes deciduous shrubs or small trees, which provide many
ecological, economic, and social benefits. We assembled and annotated the chloroplast …

Characterization of the complete chloroplast genome of seabuckthorn (Hippophae rhamnoides L.)

SY Chen, XZ Zhang - Conservation Genetics Resources, 2017 - Springer
Hippophae rhamnoides is an ecologically and economically important tree in arid areas, but
its natural distribution is now very fragmented and contracted. Here we assembled and …

Comparative analysis of complete chloroplast genome sequences within Gentianaceae and significance of identifying species

BR DONG - Chinese Traditional and Herbal Drugs, 2020 - pesquisa.bvsalud.org
The family Gentianaceae are found mostly on the Qinghai-Tibet Plateau in China, which
have important medicinal properties. Based on 27 published complete chloroplast genome …

Analysis of codon usage in the chloroplast genome of Medicago truncatula

GF YANG, KL SU, YR ZHAO… - Acta Prataculturae …, 2015 - cyxb.magtech.com.cn
The complete nucleotide sequence of the chloroplast genome of Medicago truncatula was
investigated. Fifty CDS (coding DNA sequences) selected from the chloroplast genome …

Chloroplast genomes of Arabidopsis halleri ssp. gemmifera and Arabidopsis lyrata ssp. petraea: Structures and comparative analysis

S Asaf, AL Khan, MA Khan, M Waqas, SM Kang… - Scientific reports, 2017 - nature.com
We investigated the complete chloroplast (cp) genomes of non-model Arabidopsis halleri
ssp. gemmifera and Arabidopsis lyrata ssp. petraea using Illumina paired-end sequencing to …

Synonymous codon usage bias in the plastid genome is unrelated to gene structure and shows evolutionary heterogeneity

Y Qi, W Xu, T Xing, M Zhao, N Li, L Yan… - Evolutionary …, 2015 - journals.sagepub.com
Synonymous codon usage bias (SCUB) is the nonuniform usage of codons, occurring often
in nearly all organisms. Our previous study found that SCUB is correlated with intron …

Patterns of genome-wide codon usage bias in tobacco, tomato and potato

AM Anwar, M Aljabri, M El-Soda - … & Biotechnological Equipment, 2021 - Taylor & Francis
Understanding codon usage patterns and their shaping factors in members of the
Solanaceae family may reflect important features of their evolutionary history. Here, we …

Comparative Analysis of the Chloroplast Genome for Aconitum Species: Genome Structure and Phylogenetic Relationships

C Xia, M Wang, Y Guan, J Li - Frontiers in Genetics, 2022 - frontiersin.org
Aconitum is an important medicinal group of the Ranunculaceae family and has been used
as conventional medicine in Bai, Yi, and other ethnic groups of China. There are about 350 …

Two Korean Endemic Clematis Chloroplast Genomes: Inversion, Reposition, Expansion of the Inverted Repeat Region, Phylogenetic Analysis, and Nucleotide …

KS Choi, YH Ha, HY Gil, K Choi, DK Kim, SH Oh - Plants, 2021 - mdpi.com
Previous studies on the chloroplast genome in Clematis focused on the chloroplast structure
within Anemoneae. The chloroplast genomes of Cleamtis were sequenced to provide …

The complete chloroplast genome of Cinnamomum camphora and its comparison with related Lauraceae species

C Chen, Y Zheng, S Liu, Y Zhong, Y Wu, J Li, LA Xu… - PeerJ, 2017 - peerj.com
Cinnamomum camphora, a member of the Lauraceae family, is a valuable aromatic and
timber tree that is indigenous to the south of China and Japan. All parts of Cinnamomum …