Comparitive Analysis of the Chloroplast Genomes of Three Houpoea Plants

Q Xu, Z Li, N Wu, J Yang, L Yuan, T Zhao, Y Sima, T Xu - Genes, 2023 - mdpi.com
The genus Houpoea belongs to the family Magnoliaceae, and the species in this genus
have important medicinal values. However, the investigation of the correlation between the …

Codon usage bias analysis of the chloroplast genome of cassava

X Geng, N Huang, Y Zhu, L Qin, L Hui - South African Journal of Botany, 2022 - Elsevier
Chloroplast codon preference affects gene expression efficiency and is important for
chloroplast genetic engineering applications. Despite being the third most important food …

Chloroplast Genome Differences between Asian and American Equisetum arvense (Equisetaceae) and the Origin of the Hypervariable trnY-trnE Intergenic Spacer

HT Kim, KJ Kim - PLoS One, 2014 - journals.plos.org
Comparative analyses of complete chloroplast (cp) DNA sequences within a species may
provide clues to understand the population dynamics and colonization histories of plant …

The complete chloroplast genome sequence and phylogenetic analysis of Chuanminshen (Chuanminshenviolaceum Sheh et Shan)

C Yuan, W Zhong, F Mou, Y Gong, D Pu, P Ji… - … and molecular biology …, 2017 - Springer
Chloroplast genome sequences are very useful for species identification and phylogenetics.
Chuanminshen (Chuanminshen violaceum Sheh et Shan) is an important traditional …

Comparative analysis of chloroplast genomes of 29 tomato germplasms: genome structures, phylogenetic relationships, and adaptive evolution

X Wang, S Bai, Z Zhang, F Zheng, L Song… - Frontiers in Plant …, 2023 - frontiersin.org
In order to compare and analyze the chloroplast (cp) genomes of tomato germplasms and
understand their phylogenetic relationships, the cp genomes of 29 tomato germplasms were …

Codon usage in the chloroplast genome of rice ({\sl Oryza sativa} L. ssp.{\sl japonica})

L Qingpo, X Qingzhong - Zuo wu xue bao, 2004 - europepmc.org
The codon usage in the genome is usually influenced by many factors. A correspondence
analysis was performed for exploring the effects of several important factors on codon usage …

Comparative Analysis and Characterization of Ten Complete Chloroplast Genomes of Eremurus Species (Asphodelaceae)

D Makhmudjanov, D Abdullaev, I Juramurodov… - Forests, 2023 - mdpi.com
Eremurus, a perennial rhizomatous mesophytic ornamental plant and one of the largest
genera of the family Asphodelaceae, is distributed mainly in southwestern and central Asia …

The complete chloroplast genome sequence of Aster spathulifolius (Asteraceae); genomic features and relationship with Asteraceae

KS Choi, SJ Park - Gene, 2015 - Elsevier
Aster spathulifolius, a member of the Asteraceae family, is distributed along the coast of
Japan and Korea. This plant is used for medicinal and ornamental purposes. The complete …

Comparison of the Complete Eragrostis pilosa Chloroplast Genome with Its Relatives in Eragrostideae (Chloridoideae; Poaceae)

Y Somaratne, DL Guan, NN Abbood, L Zhao… - Plants, 2019 - mdpi.com
Eragrostis of the tribe Eragrostideae is a taxonomically complex genus, because of its
polyploid nature and the presence of similar morphological characters among its species …

Complete Chloroplast Genome of Medicinal Plant Lonicera japonica: Genome Rearrangement, Intron Gain and Loss, and Implications for Phylogenetic Studies

L He, J Qian, X Li, Z Sun, X Xu, S Chen - Molecules, 2017 - mdpi.com
The complete chloroplast (cp) genome of Lonicera japonica, a common ornamental and
medicinal plant in North America and East Asia, was sequenced and analyzed. The length …