Analysis of codon usage patterns of the chloroplast genomes in the Poaceae family

Y Zhang, X Nie, X Jia, C Zhao, SS Biradar… - Australian Journal of …, 2012 - CSIRO Publishing
Codon usage patterns of 23 Poaceae chloroplast genomes were analysed in this study.
Neutrality analysis indicated that the codon usage patterns have significant correlations with …

Comparative analysis of codon bias in the chloroplast genomes of theaceae species

Z Wang, Q Cai, Y Wang, M Li, C Wang, Z Wang… - Frontiers in …, 2022 - frontiersin.org
Theaceae species are dicotyledonous angiosperms with extremely high ornamental and
economic value. The chloroplast genome is traditionally used to study species evolution …

Codon usage profiling of chloroplast genome in Magnoliaceae.

K Ji, X Song, C Chen, G Li, S Xie - 2020 - cabidigitallibrary.org
Magnoliaceae is primitive angiosperm with important economic, medicinal and ornamental
values. Caton is the core element of translation in central dogma, and its characterics …

Analysis of codon usage bias in chloroplast genome of Malania oleifera.

X Yuan, Y Liu, H Kang, Z Chen, Y Li, Y Wang - 2021 - cabidigitallibrary.org
To comprehend the codon usage bias of chloroplast genome in Malania oleifera, the 33
coding DNA sequences were analyzed to acquire the results of neutrality plot, ENC-plot …

Comparative analysis of codon usage patterns in chloroplast genomes of the Asteraceae family

X Nie, P Deng, K Feng, P Liu, X Du, FM You… - Plant molecular biology …, 2014 - Springer
Codon usage bias (CUB) is an important evolutionary feature in a genome and has been
widely documented from prokaryotes to eukaryotes. However, the significance of CUB in the …

Comparative analysis of codon usage patterns in chloroplast genomes of six Euphorbiaceae species

Z Wang, B Xu, B Li, Q Zhou, G Wang, X Jiang, C Wang… - PeerJ, 2020 - peerj.com
Euphorbiaceae plants are important as suppliers of biodiesel. In the current study, the codon
usage patterns and sources of variance in chloroplast genome sequences of six different …

Analysis of synonymous codon usage in chloroplast genome of Populus alba

M Zhou, W Long, X Li - Journal of Forestry Research, 2008 - Springer
The pattern of codon usage in the chloroplast genome of Populus alba was investigated.
Correspondence analysis (a commonly used multivariate statistical approach) and method …

Comparative studies on codon usage pattern of chloroplasts and their host nuclear genes in four plant species

Q Liu, Q Xue - Journal of genetics, 2005 - Springer
A detailed comparison was made of codon usage of chloroplast genes with their host
(nuclear) genes in the four angiosperm species Oryza sativa, Zea mays, Triticum aestivum …

Codon usage profiling of chloroplast genome in Juglandaceae

Y Zeng, L Shen, S Chen, S Qu, N Hou - Forests, 2023 - mdpi.com
Juglandaceae (walnut) is made up of several economically and ecologically valuable tree
species. Chloroplasts, vitally important for plant growth, are also a rich source of genetic and …

Patterns of synonymous codon usage bias in chloroplast genomes of seed plants

M Zhou, W Long, X Li - Forestry Studies in China, 2008 - Springer
Codon usage in chloroplast genome of six seed plants (Arabidopsis thaliana, Populus alba,
Zea mays, Triticum aestivum, Pinus koraiensis and Cycas taitungensis) was analyzed to find …