Divergence of gene body DNA methylation and evolution of plant duplicate genes
J Wang, NC Marowsky, C Fan - PloS one, 2014 - journals.plos.org
It has been shown that gene body DNA methylation is associated with gene expression.
However, whether and how deviation of gene body DNA methylation between duplicate …
However, whether and how deviation of gene body DNA methylation between duplicate …
Gene body methylation shows distinct patterns associated with different gene origins and duplication modes and has a heterogeneous relationship with gene …
Whole‐genome duplication (WGD) has been recurring and single‐gene duplication is also
widespread in angiosperms. Recent whole‐genome DNA methylation maps indicate that …
widespread in angiosperms. Recent whole‐genome DNA methylation maps indicate that …
The Evolutionary Dynamics of Orthologs That Shift in Gene Body Methylation between Arabidopsis Species
DNA methylation labels a specific subset of genes in plant genomes. Recent work has
shown that this gene-body methylation (gbM) is a conserved feature of orthologs, because …
shown that this gene-body methylation (gbM) is a conserved feature of orthologs, because …
Gene body methylation is conserved between plant orthologs and is of evolutionary consequence
DNA methylation is a common feature of eukaryotic genomes and is especially common in
noncoding regions of plants. Protein coding regions of plants are often methylated also, but …
noncoding regions of plants. Protein coding regions of plants are often methylated also, but …
Dynamic DNA methylation turnover in gene bodies is associated with enhanced gene expression plasticity in plants
Background In several eukaryotes, DNA methylation occurs within the coding regions of
many genes, termed gene body methylation (GbM). Whereas the role of DNA methylation on …
many genes, termed gene body methylation (GbM). Whereas the role of DNA methylation on …
[PDF][PDF] Distinct expression and methylation patterns for genes with different fates following a single whole-genome duplication in flowering plants
T Shi, RS Rahmani, PF Gugger, M Wang… - Molecular Biology …, 2020 - academic.oup.com
For most sequenced flowering plants, multiple whole-genome duplications (WGDs) are
found. Duplicated genes following WGD often have different fates that can quickly disappear …
found. Duplicated genes following WGD often have different fates that can quickly disappear …
Genome-Wide Analysis of DNA Methylation and Gene Expression Changes in Two Arabidopsis Ecotypes and Their Reciprocal Hybrids
H Shen, H He, J Li, W Chen, X Wang, L Guo… - The Plant …, 2012 - academic.oup.com
Heterosis is a fundamental biological phenomenon characterized by the superior
performance of a hybrid over its parents in many traits, but the underlying molecular basis …
performance of a hybrid over its parents in many traits, but the underlying molecular basis …
Tracing the origin and evolution history of methylation-related genes in plants
Background DNA methylation is a crucial epigenetic modification, which is involved in many
biological processes, including gene expression regulation, embryonic development, cell …
biological processes, including gene expression regulation, embryonic development, cell …
Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression
Background DNA methylation plays important biological roles in plants and animals. To
examine the rice genomic methylation landscape and assess its functional significance, we …
examine the rice genomic methylation landscape and assess its functional significance, we …
Genic C-methylation in soybean is associated with gene paralogs relocated to transposable element-rich pericentromeres
Most plants are polyploid due to whole-genome duplications (WGD) and can thus have
duplicated genes. Following a WGD, paralogs are often fractionated (lost) and few duplicate …
duplicated genes. Following a WGD, paralogs are often fractionated (lost) and few duplicate …