Epigenetics and plant genome evolution
Highlights•Epigenetics was envisaged as a discipline to inform evolutionary
theory.•Methylation of transposable elements (TEs) affects gene expression.•Methylation …
theory.•Methylation of transposable elements (TEs) affects gene expression.•Methylation …
DNA methylation in higher plants: past, present and future
BF Vanyushin, VV Ashapkin - Biochimica et Biophysica Acta (BBA)-Gene …, 2011 - Elsevier
A relatively high degree of nuclear DNA (nDNA) methylation is a specific feature of plant
genomes. Targets for cytosine DNA methylation in plant genomes are CG, CHG and CHH (H …
genomes. Targets for cytosine DNA methylation in plant genomes are CG, CHG and CHH (H …
Plant epigenomics—deciphering the mechanisms of epigenetic inheritance and plasticity in plants
C Köhler, N Springer - Genome Biology, 2017 - Springer
It is an exciting time to study plant epigenetics. Technological advances are providing
unprecedented opportunities to monitor chromatin modifications, gene expression, and …
unprecedented opportunities to monitor chromatin modifications, gene expression, and …
Diversity and dynamics of DNA methylation: Epigenomic resources and tools for crop breeding
T Kawakatsu, JR Ecker - Breeding science, 2019 - jstage.jst.go.jp
DNA methylation is an epigenetic modification that can affect gene expression and
transposable element (TE) activities. Because cytosine DNA methylation patterns are …
transposable element (TE) activities. Because cytosine DNA methylation patterns are …
DNA methylation increases throughout Arabidopsis development
L Ruiz-García, MT Cervera, JM Martínez-Zapater - Planta, 2005 - Springer
We used amplified fragment length polymorphisms (AFLP) to analyze the stability of DNA
methylation throughout Arabidopsis development. AFLP can detect genome-wide changes …
methylation throughout Arabidopsis development. AFLP can detect genome-wide changes …
Transmission of Epi-Alleles with MET1-Dependent Dense Methylation in Arabidopsis thaliana
M Watson, E Hawkes, P Meyer - PLoS One, 2014 - journals.plos.org
DNA methylation in plants targets cytosines in three sequence contexts, CG, CHG and CHH
(H representing A, C or T). Each of these patterns has traditionally been associated with …
(H representing A, C or T). Each of these patterns has traditionally been associated with …
Analysis of DNA methylation in plants by bisulfite sequencing
AM Foerster, OM Scheid - Plant Epigenetics: Methods and Protocols, 2010 - Springer
Methylation of cytosines is a very important epigenetic modification of genomic DNA in many
different eukaryotes, and it is frequently involved in transcriptional regulation of genes. In …
different eukaryotes, and it is frequently involved in transcriptional regulation of genes. In …
Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes
X Cao, SE Jacobsen - … of the National Academy of Sciences, 2002 - National Acad Sciences
Many plant, animal, and fungal genomes contain cytosine DNA methylation in asymmetric
sequence contexts (CpHpH, H= A, T, C). Although the enzymes responsible for this …
sequence contexts (CpHpH, H= A, T, C). Although the enzymes responsible for this …
DNA methylation and plant development
EJ Richards - Trends in Genetics, 1997 - cell.com
The development of genetic tools to alter DNA methylation has led to a deeper
understanding of the importance of DNA modification in the life strategies of different …
understanding of the importance of DNA modification in the life strategies of different …
DNA methylation in plants
EJ Finnegan, RK Genger, WJ Peacock… - Annual review of …, 1998 - annualreviews.org
▪ Abstract Methylation of cytosine residues in DNA provides a mechanism of gene control.
There are two classes of methyltransferase in Arabidopsis; one has a carboxy-terminal …
There are two classes of methyltransferase in Arabidopsis; one has a carboxy-terminal …