Analysis of codon usage bias and evolution in the chloroplast genome of Mesona chinensis Benth

D Tang, F Wei, Z Cai, Y Wei, A Khan, J Miao… - Development Genes and …, 2021 - Springer
Mesona chinensis Benth (MCB) is one of the main economic crops in tropical and
subtropical areas. To understand the codon usage bias (CUB) in M. chinensis Benth …

Codon usage by chloroplast gene is bias in Hemiptelea davidii

H Liu, Y Lu, B Lan, J Xu - Journal of Genetics, 2020 - Springer
The base composition of the chloroplast genes is of great interest because they play a highly
significant role in the evolutionary development of the plants. Evaluation of the 48 …

[HTML][HTML] Comparative analysis of codon usage patterns in chloroplast genomes of five Miscanthus species and related species

J Sheng, X She, X Liu, J Wang, Z Hu - PeerJ, 2021 - peerj.com
Miscanthus is not only a perennial fiber biomass crop, but also valuable breeding resource
for its low-nutrient requirements, photosynthetic efficiency and strong adaptability to …

[HTML][HTML] Comparative analysis of codon bias in the chloroplast genomes of theaceae species

Z Wang, Q Cai, Y Wang, M Li, C Wang, Z Wang… - Frontiers in …, 2022 - frontiersin.org
Theaceae species are dicotyledonous angiosperms with extremely high ornamental and
economic value. The chloroplast genome is traditionally used to study species evolution …

Codon usage pattern and genetic diversity in chloroplast genomes of Panicum species

G Li, L Zhang, P Xue - Gene, 2021 - Elsevier
Exploring the molecular identities and the genetic diversity of a plant species is crucial in
figuring out the evolutionary pressure of genes as well as in molecular breeding application …

[HTML][HTML] Complete chloroplast genome of Camellia japonica genome structures, comparative and phylogenetic analysis

W Li, C Zhang, X Guo, Q Liu, K Wang - PloS one, 2019 - journals.plos.org
Camellia is an economically, ecologically and phylogenetically valuable genus in the family
Theaceae. The frequent interspecific hybridization and polyploidization makes this genus …

Analysis of codon usage in the chloroplast genome of Medicago truncatula

GF YANG, KL SU, YR ZHAO… - Acta Prataculturae …, 2015 - cyxb.magtech.com.cn
The complete nucleotide sequence of the chloroplast genome of Medicago truncatula was
investigated. Fifty CDS (coding DNA sequences) selected from the chloroplast genome …

[HTML][HTML] Comparative analysis of codon usage patterns in chloroplast genomes of ten Epimedium species

Y Wang, D Jiang, K Guo, L Zhao, F Meng, J Xiao… - BMC genomic data, 2023 - Springer
Abstract Background The Phenomenon of codon usage bias exists in the genomes of
prokaryotes and eukaryotes. The codon usage pattern is affected by environmental factors …

Factors Affecting Synonymous Codon Usage Bias in Chloroplast Genome of Oncidium Gower Ramsey

C Xu, X Cai, Q Chen, H Zhou, Y Cai… - Evolutionary …, 2011 - journals.sagepub.com
Oncidium Gower Ramsey is a fascinating and important ornamental flower in floral industry.
In this research, the complete nucleotide sequence of the chloroplast genome in Oncidium …

Codon usage bias and genetic diversity in chloroplast genomes of Elaeagnus species (Myrtiflorae: Elaeagnaceae)

C Li, L Zhou, J Nie, S Wu, W Li, Y Liu, Y Liu - Physiology and Molecular …, 2023 - Springer
Codon usage bias (CUB) reveals the characteristics of species and can be utilized to
understand their evolutionary relationship, increase the target genes' expression in the …