DNA methylation profiling reveals novel biomarkers and important roles for DNA methyltransferases in prostate cancer

Y Kobayashi, DM Absher, ZG Gulzar… - Genome …, 2011 - genome.cshlp.org
Candidate gene-based studies have identified a handful of aberrant CpG DNA methylation
events in prostate cancer. However, DNA methylation profiles have not been compared on a …

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer

JH Kim, SM Dhanasekaran, JR Prensner… - Genome …, 2011 - genome.cshlp.org
Beginning with precursor lesions, aberrant DNA methylation marks the entire spectrum of
prostate cancer progression. We mapped the global DNA methylation patterns in select …

Epigenomic profiling of DNA methylation in paired prostate cancer versus adjacent benign tissue

MS Geybels, S Zhao, CJ Wong, M Bibikova… - The …, 2015 - Wiley Online Library
Background Aberrant DNA methylation may promote prostate carcinogenesis. We
investigated epigenome‐wide DNA methylation profiles in prostate cancer (PCa) compared …

Identification of novel DNA-methylated genes that correlate with human prostate cancer and high-grade prostatic intraepithelial neoplasia

JM Devaney, S Wang, S Funda, J Long… - Prostate cancer and …, 2013 - nature.com
Background: Prostate cancer (PCa) harbors a myriad of genomic and epigenetic defects.
Cytosine methylation of CpG-rich promoter DNA is an important mechanism of epigenetic …

Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal …

SS Nair, MW Coolen, C Stirzaker, JZ Song… - Epigenetics, 2011 - Taylor & Francis
DNA methylation primarily occurs at CpG dinucleotides in mammals and is a common
epigenetic mark that plays a critical role in the regulation of gene expression. Profiling DNA …

[HTML][HTML] Discovery of novel hypermethylated genes in prostate cancer using genomic CpG island microarrays

K Kron, V Pethe, L Briollais, B Sadikovic, H Ozcelik… - PloS one, 2009 - journals.plos.org
Background Promoter and 5′ end methylation regulation of tumour suppressor genes is a
common feature of many cancers. Such occurrences often lead to the silencing of these key …

[HTML][HTML] Genomic DNA methylation-derived algorithm enables accurate detection of malignant prostate tissues

E Aref-Eshghi, LC Schenkel, P Ainsworth, H Lin… - Frontiers in …, 2018 - frontiersin.org
Introduction The current methodology involving diagnosis of prostate cancer (PCa) relies on
the pathology examination of prostate needle biopsies, a method with high false negative …

[HTML][HTML] Identification of new differentially methylated genes that have potential functional consequences in prostate cancer

JW Kim, ST Kim, AR Turner, T Young, S Smith, W Liu… - PloS one, 2012 - journals.plos.org
Many differentially methylated genes have been identified in prostate cancer (PCa),
primarily using candidate gene-based assays. Recently, several global DNA methylation …

[HTML][HTML] Identification of key DNA methylation-driven genes in prostate adenocarcinoma: an integrative analysis of TCGA methylation data

N Xu, YP Wu, ZB Ke, YC Liang, H Cai, WT Su… - Journal of Translational …, 2019 - Springer
Abstract Background Prostate cancer (PCa) remains the second leading cause of deaths
due to cancer in the United States in men. The aim of this study was to perform an integrative …

[HTML][HTML] Genome-wide DNA methylation measurements in prostate tissues uncovers novel prostate cancer diagnostic biomarkers and transcription factor binding …

MK Kirby, RC Ramaker, BS Roberts, BN Lasseigne… - BMC cancer, 2017 - Springer
Background Current diagnostic tools for prostate cancer lack specificity and sensitivity for
detecting very early lesions. DNA methylation is a stable genomic modification that is …