Analysis of codon usage bias of chloroplast genes in Oryza species: Codon usage of chloroplast genes in Oryza species
S Chakraborty, S Yengkhom, A Uddin - Planta, 2020 - Springer
Main conclusion The codon usage bias in chloroplast genes of Oryza species was low and
AT rich. The pattern of codon usage was different among Oryza species and mainly …
AT rich. The pattern of codon usage was different among Oryza species and mainly …
Codon optimizer: a freeware tool for codon optimization
A Fuglsang - Protein expression and purification, 2003 - Elsevier
Selection plays a major role in the determination of codon usage in all organisms studied so
far. In highly expressed genes, a narrow set of codons is used and these codons correspond …
far. In highly expressed genes, a narrow set of codons is used and these codons correspond …
Codon usage tabulated from international DNA sequence databases: status for the year 2000
The frequencies of each of the 257 468 complete protein coding sequences (CDSs) have
been compiled from the taxonomical divisions of the GenBank DNA sequence database …
been compiled from the taxonomical divisions of the GenBank DNA sequence database …
Gene Expression and Protein Length Influence Codon Usage and Rates of Sequence Evolution in Populus tremula
PK Ingvarsson - Molecular biology and evolution, 2007 - academic.oup.com
Codon bias is generally thought to be determined by a balance between mutation, genetic
drift, and natural selection on translational efficiency. However, natural selection on codon …
drift, and natural selection on translational efficiency. However, natural selection on codon …
Synonymous codon usage in Zea mays L. nuclear genes is varied by levels of C and G-ending codons
SL Fennoy, J Bailey-Serres - Nucleic acids research, 1993 - academic.oup.com
A muitivariate statistical method called correspondence analysis was used to examine the
codon usage of onehundred-and-one nuclear genes of maize (Zea mays L.). Forty percent …
codon usage of onehundred-and-one nuclear genes of maize (Zea mays L.). Forty percent …
Comparative studies on codon usage pattern of chloroplasts and their host nuclear genes in four plant species
Q Liu, Q Xue - Journal of genetics, 2005 - Springer
A detailed comparison was made of codon usage of chloroplast genes with their host
(nuclear) genes in the four angiosperm species Oryza sativa, Zea mays, Triticum aestivum …
(nuclear) genes in the four angiosperm species Oryza sativa, Zea mays, Triticum aestivum …