FACS-based genome-wide CRISPR screens define key regulators of DNA damage signaling pathways

M Huang, F Yao, L Nie, C Wang, D Su, H Zhang, S Li… - Molecular cell, 2023 - cell.com
DNA damage-activated signaling pathways are critical for coordinating multiple cellular
processes, which must be tightly regulated to maintain genome stability. To provide a …

Revolutionizing DNA repair research and cancer therapy with CRISPR–Cas screens

SW Awwad, A Serrano-Benitez, JC Thomas… - … Reviews Molecular Cell …, 2023 - nature.com
All organisms possess molecular mechanisms that govern DNA repair and associated DNA
damage response (DDR) processes. Owing to their relevance to human disease, most …

CRISPR/CAS9-based DNA damage response screens reveal gene-drug interactions

D Su, X Feng, M Colic, Y Wang, C Zhang, C Wang… - DNA repair, 2020 - Elsevier
DNA damage response (DDR) is critically important for cell survival, genome maintenance,
and its defect has been exploited therapeutically in cancer treatment. Many DDR-targeting …

Tag-seq: a convenient and scalable method for genome-wide specificity assessment of CRISPR/Cas nucleases

H Huang, Y Hu, G Huang, S Ma, J Feng… - Communications …, 2021 - nature.com
Genome-wide identification of DNA double-strand breaks (DSBs) induced by CRISPR-
associated protein (Cas) systems is vital for profiling the off-target events of Cas nucleases …

Mapping cellular responses to DNA double-strand breaks using CRISPR technologies

Y Liu, WT Cottle, T Ha - Trends in Genetics, 2023 - cell.com
DNA double-strand breaks (DSBs) are one of the most genotoxic DNA lesions, driving a
range of pathological defects from cancers to immunodeficiencies. To combat genomic …

Massively parallel genomic perturbations with multi-target CRISPR interrogates Cas9 activity and DNA repair at endogenous sites

RS Zou, A Marin-Gonzalez, Y Liu, HB Liu, L Shen… - Nature cell …, 2022 - nature.com
Here we present an approach that combines a clustered regularly interspaced short
palindromic repeats (CRISPR) system that simultaneously targets hundreds of …

[HTML][HTML] Genome-scale mapping of DNA damage suppressors through phenotypic CRISPR-Cas9 screens

Y Zhao, D Tabet, DR Contreras, L Lao, AN Kousholt… - Molecular Cell, 2023 - cell.com
To maintain genome integrity, cells must accurately duplicate their genome and repair DNA
lesions when they occur. To uncover genes that suppress DNA damage in human cells, we …

From DNA break repair pathways to CRISPR/Cas-mediated gene knock-in methods

MR Bazaz, H Dehghani - Life sciences, 2022 - Elsevier
Various DNA breaks created via programmable CRISPR/Cas9 nuclease activity results in
different intracellular DNA break repair pathways. Based on the cellular repair pathways …

CRISPR/Cas9-induced DNA damage enriches for mutations in a p53-linked interactome: implications for CRISPR-based therapies

L Jiang, K Ingelshed, Y Shen, SV Boddul, VS Iyer… - Cancer Research, 2022 - AACR
Inactivating p53 mutations are the most abundant genetic alterations found in cancer. Here
we show that CRISPR/Cas9-induced double-stranded DNA breaks enrich for cells deficient …

A scalable CRISPR/Cas9-based fluorescent reporter assay to study DNA double-strand break repair choice

P Roidos, S Sungalee, S Benfatto, Ö Serçin… - Nature …, 2020 - nature.com
Double-strand breaks (DSBs) are the most toxic type of DNA lesions. Cells repair these
lesions using either end protection-or end resection-coupled mechanisms. To study DSB …