Agent‐based models of inflammation in translational systems biology: A decade later

Y Vodovotz, G An - Wiley Interdisciplinary Reviews: Systems …, 2019 - Wiley Online Library
Agent‐based modeling is a rule‐based, discrete‐event, and spatially explicit computational
modeling method that employs computational objects that instantiate the rules and …

Agent‐based models in translational systems biology

G An, Q Mi, J Dutta‐Moscato… - … : Systems Biology and …, 2009 - Wiley Online Library
Effective translational methodologies for knowledge representation are needed in order to
make strides against the constellation of diseases that affect the world today. These …

Addressing the translational dilemma: dynamic knowledge representation of inflammation using agent-based modeling

G An, S Christley - Critical Reviews™ in Biomedical …, 2012 - dl.begellhouse.com
Given the panoply of system-level diseases that result from disordered inflammation, such
as sepsis, atherosclerosis, cancer, and autoimmune disorders, understanding and …

[图书][B] Complex systems and computational biology approaches to acute inflammation

Y Vodovotz, G An - 2013 - Springer
We are now standing at the cusp of systems-based understanding of the processes that
underlie, drive, and control the acute inflammatory response. Based on decades of …

Translational systems biology of inflammation

Y Vodovotz, M Csete, J Bartels… - PLoS computational …, 2008 - journals.plos.org
Inflammation is a complex, multi-scale biologic response to stress that is also required for
repair and regeneration after injury. Despite the repository of detailed data about the cellular …

Translational systems biology using an agent‐based approach for dynamic knowledge representation: an evolutionary paradigm for biomedical research

GC An - Wound Repair and Regeneration, 2010 - Wiley Online Library
The greatest challenge facing the biomedical research community is the effective translation
of basic mechanistic knowledge into clinically effective therapeutics. This challenge is most …

Introduction of an agent-based multi-scale modular architecture for dynamic knowledge representation of acute inflammation

G An - Theoretical Biology and Medical Modelling, 2008 - Springer
Background One of the greatest challenges facing biomedical research is the integration
and sharing of vast amounts of information, not only for individual researchers, but also for …

Utilizing the heterogeneity of clinical data for model refinement and rule discovery through the application of genetic algorithms to calibrate a high-dimensional agent …

C Cockrell, G An - Frontiers in physiology, 2021 - frontiersin.org
Introduction: Accounting for biological heterogeneity represents one of the greatest
challenges in biomedical research. Dynamic computational and mathematical models can …

Innovations in integrating machine learning and agent-based modeling of biomedical systems

N Sivakumar, C Mura, SM Peirce - Frontiers in systems biology, 2022 - frontiersin.org
Agent-based modeling (ABM) is a well-established computational paradigm for simulating
complex systems in terms of the interactions between individual entities that comprise the …

Translational potential of systems‐based models of inflammation

PT Foteinou, SE Calvano, SF Lowry… - Clinical and …, 2009 - Wiley Online Library
A critical goal of translational research is to convert basic science to clinically relevant
actions related to disease prevention, diagnosis, and eventually enable physicians to …