Analysis of codon usage bias of chloroplast genes in Oryza species: Codon usage of chloroplast genes in Oryza species
S Chakraborty, S Yengkhom, A Uddin - Planta, 2020 - Springer
Main conclusion The codon usage bias in chloroplast genes of Oryza species was low and
AT rich. The pattern of codon usage was different among Oryza species and mainly …
AT rich. The pattern of codon usage was different among Oryza species and mainly …
Patterns of synonymous codon usage bias in chloroplast genomes of seed plants
Codon usage in chloroplast genome of six seed plants (Arabidopsis thaliana, Populus alba,
Zea mays, Triticum aestivum, Pinus koraiensis and Cycas taitungensis) was analyzed to find …
Zea mays, Triticum aestivum, Pinus koraiensis and Cycas taitungensis) was analyzed to find …
[HTML][HTML] Comparative analysis of codon bias in the chloroplast genomes of theaceae species
Z Wang, Q Cai, Y Wang, M Li, C Wang, Z Wang… - Frontiers in …, 2022 - frontiersin.org
Theaceae species are dicotyledonous angiosperms with extremely high ornamental and
economic value. The chloroplast genome is traditionally used to study species evolution …
economic value. The chloroplast genome is traditionally used to study species evolution …
Analysis of synonymous codon usage of chloroplast genome in Porphyra umbilicalis
G Li, Z Pan, S Gao, Y He, Q Xia, Y Jin, H Yao - Genes & genomics, 2019 - Springer
Background Synonymous codon usage bias is noticed in the genome of every organism,
influenced by mutation pressure and natural selection. The analysis of codon usage pattern …
influenced by mutation pressure and natural selection. The analysis of codon usage pattern …
[HTML][HTML] Synonymous codon usage in chloroplast genome of Coffea arabica
Synonymous codon usage of 53 protein coding genes in chloroplast genome of Coffea
arabica was analyzed for the first time to find out the possible factors contributing codon …
arabica was analyzed for the first time to find out the possible factors contributing codon …
Comparative studies on codon usage pattern of chloroplasts and their host nuclear genes in four plant species
Q Liu, Q Xue - Journal of genetics, 2005 - Springer
A detailed comparison was made of codon usage of chloroplast genes with their host
(nuclear) genes in the four angiosperm species Oryza sativa, Zea mays, Triticum aestivum …
(nuclear) genes in the four angiosperm species Oryza sativa, Zea mays, Triticum aestivum …
Analysis of codon usage patterns of the chloroplast genomes in the Poaceae family
Y Zhang, X Nie, X Jia, C Zhao, SS Biradar… - Australian Journal of …, 2012 - CSIRO Publishing
Codon usage patterns of 23 Poaceae chloroplast genomes were analysed in this study.
Neutrality analysis indicated that the codon usage patterns have significant correlations with …
Neutrality analysis indicated that the codon usage patterns have significant correlations with …
Comparative analysis of codon usage patterns in chloroplast genomes of the Asteraceae family
X Nie, P Deng, K Feng, P Liu, X Du, FM You… - Plant molecular biology …, 2014 - Springer
Codon usage bias (CUB) is an important evolutionary feature in a genome and has been
widely documented from prokaryotes to eukaryotes. However, the significance of CUB in the …
widely documented from prokaryotes to eukaryotes. However, the significance of CUB in the …
Codon usage bias and genetic diversity in chloroplast genomes of Elaeagnus species (Myrtiflorae: Elaeagnaceae)
C Li, L Zhou, J Nie, S Wu, W Li, Y Liu, Y Liu - Physiology and Molecular …, 2023 - Springer
Codon usage bias (CUB) reveals the characteristics of species and can be utilized to
understand their evolutionary relationship, increase the target genes' expression in the …
understand their evolutionary relationship, increase the target genes' expression in the …
Analysis of synonymous codon usage in chloroplast genome of Populus alba
The pattern of codon usage in the chloroplast genome of Populus alba was investigated.
Correspondence analysis (a commonly used multivariate statistical approach) and method …
Correspondence analysis (a commonly used multivariate statistical approach) and method …
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