Systems biology: its practice and challenges

A Aderem - Cell, 2005 - cell.com
… To practice systems biology, one must capture and integrate global sets of biological
data from as many hierarchical levels of information as possible (see Figure 1). These could …

[HTML][HTML] From functional genomics to systems biology: concepts and practices

C Auffray, S Imbeaud… - Comptes …, 2003 - comptes-rendus.academie-sciences …
Systems biology requires the development and application … tools to carry out systems approach
and, accordingly, requires a … systems biology will be a powerful engine driving biology in …

Fundamental issues in systems biology

MA O'Malley, J Dupré - BioEssays, 2005 - Wiley Online Library
… The project of localising and defining biological systems can instead be developed within
existing practice. This project could accomplish two things: it could make the new …

The art and practice of systems biology in medicine: mapping patterns of relationships

J Van der Greef, S Martin, P Juhasz… - Journal of proteome …, 2007 - ACS Publications
… In this paper, we describe the current status of a fully integrated and fully operational
systems biology production platform. This platform has resulted from a 6-year effort which has …

[图书][B] Systems biology

B Palsson - 2015 - books.google.com
Best practices in manual reconstruction call for a module-by-module reconstruction where
each addition is tested for accuracy and effect on the functions of the network. In the rest of …

How modeling standards, software, and initiatives support reproducibility in systems biology and systems medicine

D Waltemath, O Wolkenhauer - IEEE Transactions on …, 2016 - ieeexplore.ieee.org
… Furthermore, best practices in documenting published research results should be followed.
For example, the Reproducibility Initiative advices researchers to first conduct a direct …

Defining systems biology: a brief overview of the term and field

MV Schneider - In silico systems biology, 2013 - Springer
… In silico systems biology as intended in this book relies on the definition of systems
biology in terms of modeling and simulations of biological processes. Ultimately, the goal of …

Systems biology and the future of medicine

J Loscalzo, AL Barabasi - … Reviews: Systems Biology and …, 2011 - Wiley Online Library
… of systems principles to medicine reviewed in this article, the breadth of the success of this
approach has yet to be realized but will, no doubt, revolutionize the science and practice of …

The roles of integration in molecular systems biology

MA O'malley, OS Soyer - Studies in History and Philosophy of Science Part …, 2012 - Elsevier
… often talk about integrating disciplines, this usually boils down to the three sets of integrative
practices we outlined in Section 3. Multidisciplinary capacities certainly inform and even …

Modeling and simulation tools: from systems biology to systems medicine

BG Olivier, MJ Swat, MJ Moné - Systems Medicine, 2016 - Springer
… methodologies: Systems Biology and Pharmacometrics. From the Systems Biology perspective
… As a consequence, the transition of Systems Biology to Systems Medicine in practice will, …