Transition states and cell fate decisions in epigenetic landscapes
Waddington's epigenetic landscape is an abstract metaphor frequently used to represent the
relationship between gene activity and cell fates during development. Over the past few …
relationship between gene activity and cell fates during development. Over the past few …
Lineage specification in the mouse preimplantation embryo
C Chazaud, Y Yamanaka - Development, 2016 - journals.biologists.com
During mouse preimplantation embryo development, totipotent blastomeres generate the
first three cell lineages of the embryo: trophectoderm, epiblast and primitive endoderm. In …
first three cell lineages of the embryo: trophectoderm, epiblast and primitive endoderm. In …
[HTML][HTML] A comprehensive roadmap of murine spermatogenesis defined by single-cell RNA-seq
Spermatogenesis requires intricate interactions between the germline and somatic cells.
Within a given cross section of a seminiferous tubule, multiple germ and somatic cell types …
Within a given cross section of a seminiferous tubule, multiple germ and somatic cell types …
[HTML][HTML] De novo prediction of stem cell identity using single-cell transcriptome data
Adult mitotic tissues like the intestine, skin, and blood undergo constant turnover throughout
the life of an organism. Knowing the identity of the stem cell is crucial to understanding …
the life of an organism. Knowing the identity of the stem cell is crucial to understanding …
Defining the three cell lineages of the human blastocyst by single-cell RNA-seq
P Blakeley, NME Fogarty, I Del Valle… - …, 2015 - journals.biologists.com
Here, we provide fundamental insights into early human development by single-cell RNA-
sequencing of human and mouse preimplantation embryos. We elucidate conserved …
sequencing of human and mouse preimplantation embryos. We elucidate conserved …
[图书][B] Stochastic processes in cell biology
PC Bressloff - 2014 - Springer
One of the major challenges in modern biology is to understand how the molecular
components of a living cell operate in a highly noisy environment. What are the specific …
components of a living cell operate in a highly noisy environment. What are the specific …
Comparative analysis of human and mouse development: From zygote to pre-gastrulation
Abstract Development of the mammalian embryo begins with formation of the totipotent
zygote during fertilization. This initial cell is able to give rise to every embryonic tissue of the …
zygote during fertilization. This initial cell is able to give rise to every embryonic tissue of the …
[HTML][HTML] Tracing the expression of circular RNAs in human pre-implantation embryos
Y Dang, L Yan, B Hu, X Fan, Y Ren, R Li, Y Lian, J Yan… - Genome biology, 2016 - Springer
Abstract Background PolyA–RNAs have not been widely analyzed in human pre-
implantation embryos due to the scarcity of materials. In particular, circular RNA (circRNA), a …
implantation embryos due to the scarcity of materials. In particular, circular RNA (circRNA), a …
[HTML][HTML] Systems biology approaches integrated with artificial intelligence for optimized metabolic engineering
M Helmy, D Smith, K Selvarajoo - Metabolic engineering communications, 2020 - Elsevier
Metabolic engineering aims to maximize the production of bio-economically important
substances (compounds, enzymes, or other proteins) through the optimization of the …
substances (compounds, enzymes, or other proteins) through the optimization of the …
[HTML][HTML] NANOG initiates epiblast fate through the coordination of pluripotency genes expression
N Allègre, S Chauveau, C Dennis, Y Renaud… - Nature …, 2022 - nature.com
The epiblast is the source of all mammalian embryonic tissues and of pluripotent embryonic
stem cells. It differentiates alongside the primitive endoderm in a “salt and pepper” pattern …
stem cells. It differentiates alongside the primitive endoderm in a “salt and pepper” pattern …