Epigenetics and the environment: emerging patterns and implications
R Feil, MF Fraga - Nature reviews genetics, 2012 - nature.com
Epigenetic phenomena in animals and plants are mediated by DNA methylation and stable
chromatin modifications. There has been considerable interest in whether environmental …
chromatin modifications. There has been considerable interest in whether environmental …
Epigenome-wide association studies for common human diseases
VK Rakyan, TA Down, DJ Balding, S Beck - Nature Reviews Genetics, 2011 - nature.com
Despite the success of genome-wide association studies (GWASs) in identifying loci
associated with common diseases, a substantial proportion of the causality remains …
associated with common diseases, a substantial proportion of the causality remains …
Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation in the mouse genome
Differential methylation of the two parental genomes in placental mammals is essential for
genomic imprinting and embryogenesis. To systematically study this epigenetic process, we …
genomic imprinting and embryogenesis. To systematically study this epigenetic process, we …
Two-step epigenetic Mendelian randomization: a strategy for establishing the causal role of epigenetic processes in pathways to disease
CL Relton, G Davey Smith - International journal of …, 2012 - academic.oup.com
The burgeoning interest in the field of epigenetics has precipitated the need to develop
approaches to strengthen causal inference when considering the role of epigenetic …
approaches to strengthen causal inference when considering the role of epigenetic …
The effects of chromatin organization on variation in mutation rates in the genome
KD Makova, RC Hardison - Nature Reviews Genetics, 2015 - nature.com
The variation in local rates of mutations can affect both the evolution of genes and their
function in normal and cancer cells. Deciphering the molecular determinants of this variation …
function in normal and cancer cells. Deciphering the molecular determinants of this variation …
Genome-wide survey reveals predisposing diabetes type 2-related DNA methylation variations in human peripheral blood
Inter-individual DNA methylation variations were frequently hypothesized to alter individual
susceptibility to Type 2 Diabetes Mellitus (T2DM). Sequence-influenced methylations were …
susceptibility to Type 2 Diabetes Mellitus (T2DM). Sequence-influenced methylations were …
Genetic–epigenetic interactions in cis: a major focus in the post-GWAS era
Studies on genetic–epigenetic interactions, including the mapping of methylation
quantitative trait loci (mQTLs) and haplotype-dependent allele-specific DNA methylation …
quantitative trait loci (mQTLs) and haplotype-dependent allele-specific DNA methylation …
Long-range epigenetic regulation is conferred by genetic variation located at thousands of independent loci
M Lemire, SHE Zaidi, M Ban, B Ge, D Aïssi… - Nature …, 2015 - nature.com
The interplay between genetic and epigenetic variation is only partially understood. One
form of epigenetic variation is methylation at CpG sites, which can be measured as …
form of epigenetic variation is methylation at CpG sites, which can be measured as …
Mechanisms and disease associations of haplotype-dependent allele-specific DNA methylation
C Do, CF Lang, J Lin, H Darbary, I Krupska… - The American Journal of …, 2016 - cell.com
Haplotype-dependent allele-specific methylation (hap-ASM) can impact disease
susceptibility, but maps of this phenomenon using stringent criteria in disease-relevant …
susceptibility, but maps of this phenomenon using stringent criteria in disease-relevant …
SNPs located at CpG sites modulate genome-epigenome interaction
D Zhi, S Aslibekyan, MR Irvin, SA Claas, IB Borecki… - Epigenetics, 2013 - Taylor & Francis
DNA methylation is an important molecular-level phenotype that links genotypes and
complex disease traits. Previous studies have found local correlation between genetic …
complex disease traits. Previous studies have found local correlation between genetic …