TET-mediated active DNA demethylation: mechanism, function and beyond

X Wu, Y Zhang - Nature Reviews Genetics, 2017 - nature.com
In mammals, DNA methylation in the form of 5-methylcytosine (5mC) can be actively
reversed to unmodified cytosine (C) through TET dioxygenase-mediated oxidation of 5mC to …

Mapping the epigenetic modifications of DNA and RNA

LY Zhao, J Song, Y Liu, CX Song, C Yi - Protein & cell, 2020 - academic.oup.com
Over 17 and 160 types of chemical modifications have been identified in DNA and RNA,
respectively. The interest in understanding the various biological functions of DNA and RNA …

Transgenerational inheritance of acquired epigenetic signatures at CpG islands in mice

Y Takahashi, MM Valencia, Y Yu, Y Ouchi, K Takahashi… - Cell, 2023 - cell.com
Transgenerational epigenetic inheritance in mammals remains a debated subject. Here, we
demonstrate that DNA methylation of promoter-associated CpG islands (CGIs) can be …

Regulation of transposable elements by DNA modifications

Ö Deniz, JM Frost, MR Branco - Nature Reviews Genetics, 2019 - nature.com
Maintenance of genome stability requires control over the expression of transposable
elements (TEs), whose activity can have substantial deleterious effects on the host …

Interplay between chromatin marks in development and disease

SM Janssen, MC Lorincz - Nature Reviews Genetics, 2022 - nature.com
DNA methylation (DNAme) and histone post-translational modifications (PTMs) have
important roles in transcriptional regulation. Although many reports have characterized the …

[PDF][PDF] In vitro reconstitution of the whole male germ-cell development from mouse pluripotent stem cells

Y Ishikura, H Ohta, T Sato, Y Murase, Y Yabuta… - Cell Stem Cell, 2021 - cell.com
Mammalian male germ-cell development consists of three distinct phases: primordial germ
cell (PGC) development, male germ-cell specification for spermatogonium development …

Allelic reprogramming of the histone modification H3K4me3 in early mammalian development

B Zhang, H Zheng, B Huang, W Li, Y Xiang, X Peng… - Nature, 2016 - nature.com
Histone modifications are fundamental epigenetic regulators that control many crucial
cellular processes. However, whether these marks can be passed on from mammalian …

[PDF][PDF] A unique gene regulatory network resets the human germline epigenome for development

WWC Tang, S Dietmann, N Irie, HG Leitch, VI Floros… - Cell, 2015 - cell.com
Resetting of the epigenome in human primordial germ cells (hPGCs) is critical for
development. We show that the transcriptional program of hPGCs is distinct from that in …

[PDF][PDF] The transcriptome and DNA methylome landscapes of human primordial germ cells

F Guo, L Yan, H Guo, L Li, B Hu, Y Zhao, J Yong, Y Hu… - Cell, 2015 - cell.com
Germ cells are vital for transmitting genetic information from one generation to the next and
for maintaining the continuation of species. Here, we analyze the transcriptome of human …

Specification and epigenetic programming of the human germ line

WWC Tang, T Kobayashi, N Irie, S Dietmann… - Nature Reviews …, 2016 - nature.com
Primordial germ cells (PGCs), the precursors of sperm and eggs, are established in
perigastrulation-stage embryos in mammals. Signals from extra-embryonic tissues induce a …