Gut microbial metabolites as multi-kingdom intermediates
KA Krautkramer, J Fan, F Bäckhed - Nature Reviews Microbiology, 2021 - nature.com
The gut microbiota contributes to host physiology through the production of a myriad of
metabolites. These metabolites exert their effects within the host as signalling molecules and …
metabolites. These metabolites exert their effects within the host as signalling molecules and …
In Vitro Studies of Persister Cells
N Kaldalu, V Hauryliuk, KJ Turnbull… - Microbiology and …, 2020 - Am Soc Microbiol
Many bacterial pathogens can permanently colonize their host and establish either chronic
or recurrent infections that the immune system and antimicrobial therapies fail to eradicate …
or recurrent infections that the immune system and antimicrobial therapies fail to eradicate …
Critical assessment of DNA adenine methylation in eukaryotes using quantitative deconvolution
The discovery of N6-methyldeoxyadenine (6mA) across eukaryotes led to a search for
additional epigenetic mechanisms. However, some studies have highlighted confounding …
additional epigenetic mechanisms. However, some studies have highlighted confounding …
Conserved DNA methyltransferases: a window into fundamental mechanisms of epigenetic regulation in bacteria
PH Oliveira, G Fang - Trends in microbiology, 2021 - cell.com
An increasing number of studies have reported that bacterial DNA methylation has important
functions beyond the roles in restriction-modification systems, including the ability of …
functions beyond the roles in restriction-modification systems, including the ability of …
Designing biological circuits: synthetic biology within the operon model and beyond
MA English, RV Gayet, JJ Collins - Annual Review of …, 2021 - annualreviews.org
In 1961, Jacob and Monod proposed the operon model of gene regulation. At the model's
core was the modular assembly of regulators, operators, and structural genes. To illustrate …
core was the modular assembly of regulators, operators, and structural genes. To illustrate …
Navigating the pitfalls of mapping DNA and RNA modifications
Y Kong, EA Mead, G Fang - Nature Reviews Genetics, 2023 - nature.com
Chemical modifications to nucleic acids occur across the kingdoms of life and carry
important regulatory information. Reliable high-resolution mapping of these modifications is …
important regulatory information. Reliable high-resolution mapping of these modifications is …
Using all our genomes: Blood‐based liquid biopsies for the early detection of cancer
E Adams, GD Sepich‐Poore, S Miller‐Montgomery… - View, 2022 - Wiley Online Library
The pursuit of highly sensitive and specific cancer diagnostics based on cell‐free nucleic
acids isolated from minimally invasive liquid biopsies has been an area of intense research …
acids isolated from minimally invasive liquid biopsies has been an area of intense research …
Multiscale dynamic structuring of bacterial chromosomes
VS Lioy, I Junier, F Boccard - Annual review of microbiology, 2021 - annualreviews.org
Since the nucleoid was isolated from bacteria in the 1970s, two fundamental questions
emerged and are still in the spotlight: how bacteria organize their chromosomes to fit inside …
emerged and are still in the spotlight: how bacteria organize their chromosomes to fit inside …
[HTML][HTML] Vitamin B-12 and the gastrointestinal microbiome: a systematic review
Vitamin B-12 deficiency is a major public health problem affecting individuals across the
lifespan, with known hematological, neurological, and obstetric consequences. Emerging …
lifespan, with known hematological, neurological, and obstetric consequences. Emerging …
Roles of physical exercise in neurodegeneration: reversal of epigenetic clock
M Xu, JY Zhu, XD Liu, MY Luo, NJ Xu - Translational Neurodegeneration, 2021 - Springer
The epigenetic clock is defined by the DNA methylation (DNAm) level and has been
extensively applied to distinguish biological age from chronological age. Aging-related …
extensively applied to distinguish biological age from chronological age. Aging-related …