Characterising sex differences of autosomal DNA methylation in whole blood using the Illumina EPIC array

OA Grant, Y Wang, M Kumari, NR Zabet… - Clinical epigenetics, 2022 - Springer
Background Sex differences are known to play a role in disease aetiology, progression and
outcome. Previous studies have revealed autosomal epigenetic differences between males …

Insights into ageing rates comparison across tissues from recalibrating cerebellum DNA methylation clock

Y Wang, OA Grant, X Zhai, KD Mcdonald-Maier… - GeroScience, 2024 - Springer
DNA methylation (DNAm)-based age clocks have been studied extensively as a biomarker
of human ageing and a risk factor for age-related diseases. Despite different tissues having …

InterpolatedXY: a two-step strategy to normalize DNA methylation microarray data avoiding sex bias

Y Wang, TJ Gorrie-Stone, OA Grant… - …, 2022 - academic.oup.com
Motivation Data normalization is an essential step to reduce technical variation within and
between arrays. Due to the different karyotypes and the effects of X chromosome …

The application of epiphenotyping approaches to DNA methylation array studies of the human placenta

A Khan, AM Inkster, MS Peñaherrera, S King… - Epigenetics & …, 2023 - Springer
Background Genome-wide DNA methylation (DNAme) profiling of the placenta with Illumina
Infinium Methylation bead arrays is often used to explore the connections between in utero …

Klinefelter syndrome: Etiology and clinical considerations in male infertility

X Chen, X Zhang, T Jiang, W Xu - Biology of Reproduction, 2024 - academic.oup.com
Klinefelter syndrome (KS) is the most prevalent chromosomal disorder occurring in males. It
is defined by an additional X chromosome, 47, XXY, resulting from errors in chromosomal …

Epigenetics and island‐mainland divergence in an insectivorous small mammal

ML Cossette, DT Stewart, A Haghani… - Molecular …, 2023 - Wiley Online Library
Geographically isolated populations, specifically island‐mainland counterparts, tend to
exhibit phenotypic variation in many species. The so‐called island syndrome occurs when …

A permutation-based approach using a rank-based statistic to identify sex differences in epigenetics

AJ Sommer, J Okonkwo, J Monteiro, MAC Bind - Scientific Reports, 2023 - nature.com
Epigenetic sex differences and their resulting implications for human health have been
studied for about a decade. The objective of this paper is to use permutation-based …

[PDF][PDF] Biolearn, an open-source library for biomarkers of aging

K Ying, S Paulson, M Perez-Guevara, M Emamifar… - bioRxiv, 2023 - health.uconn.edu
Identifying and validating biomarkers of aging is pivotal for understanding the aging process
and testing longevity interventions. Despite the development of numerous aging biomarkers …

Metabolomic predictors of phenotypic traits can replace and complement measured clinical variables in population-scale expression profiling studies

A Niehues, D Bizzarri, MJT Reinders, PE Slagboom… - BMC genomics, 2022 - Springer
Population-scale expression profiling studies can provide valuable insights into biological
and disease-underlying mechanisms. The availability of phenotypic traits is essential for …

The effects of age, sex, weight, and breed on canid methylomes

L Rubbi, H Zhang, J Feng, C He, P Kurnia, P Ratan… - Epigenetics, 2022 - Taylor & Francis
Unlike genomes, which are static throughout the lifespan of an organism, DNA methylomes
are dynamic. To study these dynamics, we developed quantitative models that measure the …