Principles and challenges of genome-wide DNA methylation analysis

PW Laird - Nature Reviews Genetics, 2010 - nature.com
Methylation of cytosine bases in DNA provides a layer of epigenetic control in many
eukaryotes that has important implications for normal biology and disease. Therefore …

[HTML][HTML] A comparative overview of epigenomic profiling methods

M Mehrmohamadi, MH Sepehri, N Nazer… - Frontiers in cell and …, 2021 - frontiersin.org
In the past decade, assays that profile different aspects of the epigenome have grown
exponentially in number and variation. However, standard guidelines for researchers to …

[HTML][HTML] Expression of miR-196b is not exclusively MLL-driven but is especially linked to activation of HOXA genes in pediatric acute lymphoblastic leukemia

D Schotte, EAM Lange-Turenhout, DJPM Stumpel… - …, 2010 - ncbi.nlm.nih.gov
Expression of miR-196b is not exclusively MLL-driven but is especially linked to activation of
HOXA genes in pediatric acute lymphoblastic leukemia - PMC Back to Top Skip to main content …

[HTML][HTML] Interleukin-6 determines protein stabilization of DNA methyltransferases and alters DNA promoter methylation of genes associated with insulin signaling and …

A Balakrishnan, KP Guruprasad, K Satyamoorthy… - Laboratory …, 2018 - Elsevier
Individuals with type 2 diabetes (T2D) display vascular insulin resistance and decreased
nitric oxide production leading to vasoconstriction and atherosclerosis. Soluble factors such …

Laboratory methods to decipher epigenetic signatures: a comparative review

R Halabian, V Arshad, A Ahmadi, P Saeedi… - Cellular & Molecular …, 2021 - Springer
Epigenetics refers to nucleotide sequence-independent events, and heritable changes,
including DNA methylation and histone modification (as the two main processes) …

Changes in DNA methylation are associated with the development of drug resistance in cervical cancer cells

CC Chen, KD Lee, MY Pai, PY Chu, CC Hsu… - Cancer Cell …, 2015 - Springer
Background and propose Changes in DNA methylation are associated with changes in
somatic cell fate without the alteration of coding sequences. In addition to its use as a …

Environmental epigenomics: Current approaches to assess epigenetic effects of endocrine disrupting compounds (EDC's) on human health

N Tapia-Orozco, G Santiago-Toledo, V Barrón… - Environmental …, 2017 - Elsevier
Environmental Epigenomics is a developing field to study the epigenetic effect on human
health from exposure to environmental factors. Endocrine disrupting chemicals have been …

Genomics of medulloblastoma: from Giemsa-banding to next-generation sequencing in 20 years

PA Northcott, JT Rutka, MD Taylor - Neurosurgical focus, 2010 - thejns.org
Advances in the field of genomics have recently enabled the unprecedented
characterization of the cancer genome, providing novel insight into the molecular …

Current status and future prospects of toxicogenomics in drug discovery

SR Khan, A Baghdasarian, RP Fahlman, K Michail… - Drug discovery today, 2014 - Elsevier
In drug discovery and development (DDD), the efficacy, safety and cost of new chemical
entities are the main concerns of the pharmaceutical industry. Continuously updated and …

An integrated workflow for DNA methylation analysis

P Li, F Demirci, G Mahalingam, C Demirci… - Journal of genetics and …, 2013 - Elsevier
The analysis of cytosine methylation provides a new way to assess and describe epigenetic
regulation at a whole-genome level in many eukaryotes. DNA methylation has a …