[HTML][HTML] DNA methylation analysis: choosing the right method

S Kurdyukov, M Bullock - Biology, 2016 - mdpi.com
In the burgeoning field of epigenetics, there are several methods available to determine the
methylation status of DNA samples. However, choosing the method that is best suited to …

[HTML][HTML] MHC and Evolution in Teleosts

U Grimholt - Biology, 2016 - mdpi.com
Major histocompatibility complex (MHC) molecules are key players in initiating immune
responses towards invading pathogens. Both MHC class I and class II genes are present in …

Differential genome-wide profiling of tandem 3′ UTRs among human breast cancer and normal cells by high-throughput sequencing

Y Fu, Y Sun, Y Li, J Li, X Rao, C Chen, A Xu - Genome research, 2011 - genome.cshlp.org
Tandem 3′ UTRs produced by alternative polyadenylation (APA) play an important role in
gene expression by impacting mRNA stability, translation, and translocation in cells. Several …

[HTML][HTML] DNA methylation: a timeline of methods and applications

A Harrison, A Parle-McDermott - Frontiers in genetics, 2011 - frontiersin.org
DNA methylation is a biochemical process where a DNA base, usually cytosine, is
enzymatically methylated at the 5-carbon position. An epigenetic modification associated …

Loss of the Notch effector RBPJ promotes tumorigenesis

I Kulic, G Robertson, L Chang, JHE Baker… - Journal of Experimental …, 2015 - rupress.org
Aberrant Notch activity is oncogenic in several malignancies, but it is unclear how
expression or function of downstream elements in the Notch pathway affects tumor growth …

[HTML][HTML] Integrative analyses of gene expression and DNA methylation profiles in breast cancer cell line models of tamoxifen-resistance indicate a potential role of …

X Lin, J Li, G Yin, Q Zhao, D Elias, AE Lykkesfeldt… - Breast cancer …, 2013 - Springer
Introduction Development of resistance to tamoxifen is an important clinical issue in the
treatment of breast cancer. Tamoxifen resistance may be the result of acquisition of …

Comparison of genome‐wide analysis techniques to DNA methylation analysis in human cancer

N Soozangar, MR Sadeghi, F Jeddi… - Journal of cellular …, 2018 - Wiley Online Library
DNA methylation was the first epigenetic modification to be detected in human cancers with
specific relation to aberrant gene expression. Herein, DNA methylation analysis explains …

Effect of vitrification on promoter methylation and the expression of pluripotency and differentiation genes in mouse blastocysts

XM Zhao, WH Du, HS Hao, D Wang… - Molecular …, 2012 - Wiley Online Library
The present study was designed to determine the effects of vitrification on promoter
methylation and the expression levels of pluripotency and differentiation genes in mouse …

[HTML][HTML] Effect of vitrification on promoter CpG island methylation patterns and expression levels of DNA methyltransferase 1o, histone acetyltransferase 1, and …

XM Zhao, JJ Ren, WH Du, HS Hao, D Wang, T Qin… - Fertility and sterility, 2013 - Elsevier
OBJECTIVE: To investigate the effect of vitrification on Dnmt1o, Hat1, and Hdac1 promoter
CpG island methylation patterns and messenger RNA (mRNA) expression levels in mouse …

[HTML][HTML] Genome-wide profiling of DNA methylation in human cancer cells

K Ogoshi, S Hashimoto, Y Nakatani, W Qu, K Oshima… - Genomics, 2011 - Elsevier
Global changes in DNA methylation correlate with altered gene expression and genomic
instability in cancer. We have developed a methylation-specific digital sequencing (MSDS) …