Challenges and opportunities for quantifying roots and rhizosphere interactions through imaging and image analysis

HF Downie, MO Adu, S Schmidt, W Otten… - Plant, cell & …, 2015 - Wiley Online Library
The morphology of roots and root systems influences the efficiency by which plants acquire
nutrients and water, anchor themselves and provide stability to the surrounding soil. Plant …

Quantitative time-lapse fluorescence microscopy in single cells

D Muzzey, A Van Oudenaarden - Annual Review of Cell and …, 2009 - annualreviews.org
The cloning of green fluorescent protein (GFP) 15 years ago revolutionized cell biology by
permitting visualization of a wide range of molecular mechanisms within living cells. Though …

A Spatio-Temporal Understanding of Growth Regulation during the Salt Stress Response in Arabidopsis

Y Geng, R Wu, CW Wee, F Xie, X Wei, PMY Chan… - The Plant …, 2013 - academic.oup.com
Plant environmental responses involve dynamic changes in growth and signaling, yet little is
understood as to how progress through these events is regulated. Here, we explored the …

How a plant builds leaves

SA Braybrook, C Kuhlemeier - The Plant Cell, 2010 - academic.oup.com
A leaf develops from a few cells that grow, divide, and differentiate to form a complex organ
that is precisely positioned relative to its neighbors. How cells communicate to achieve such …

WUSCHEL mediates stem cell homeostasis by regulating stem cell number and patterns of cell division and differentiation of stem cell progenitors

RK Yadav, M Tavakkoli, GV Reddy - Development, 2010 - journals.biologists.com
Plant stem cell populations, unlike their animal counterparts, do not use cell migration and
oriented cell divisions to maintain their size, and therefore require a precise coordination …

An imaging method for oxygen distribution, respiration and photosynthesis at a microscopic level of resolution

H Tschiersch, G Liebsch, L Borisjuk… - New …, 2012 - Wiley Online Library
Biological samples are far from homogeneous, with complex compartmentation being the
norm. Major physiological processes such as respiration do not therefore occur in a uniform …

Light sheet microscopy and live imaging of plants

B Berthet, A Maizel - Journal of microscopy, 2016 - Wiley Online Library
Light sheet fluorescence microscopy (LSFM) is increasingly used to investigate biological
processes in animals as well as in plants. LSFM achieves optical sectioning by the selective …

Calcium imaging perspectives in plants

CN Kanchiswamy, M Malnoy, A Occhipinti… - International journal of …, 2014 - mdpi.com
The calcium ion (Ca2+) is a versatile intracellular messenger. It provides dynamic regulation
of a vast array of gene transcriptions, protein kinases, transcription factors and other …

Computational morphodynamics of plants: integrating development over space and time

AHK Roeder, PT Tarr, C Tobin, X Zhang… - … reviews Molecular cell …, 2011 - nature.com
The emerging field of computational morphodynamics aims to understand the changes that
occur in space and time during development by combining three technical strategies: live …

What has been seen cannot be unseen—detecting auxin in vivo

B Pařízková, M Pernisová, O Novák - International Journal of Molecular …, 2017 - mdpi.com
Auxins mediate various processes that are involved in plant growth and development in
response to specific environmental conditions. Its proper spatio-temporal distribution that is …