Aquaculture genomics, genetics and breeding in the United States: current status, challenges, and priorities for future research

Aquaculture Genomics, Genetics and Breeding … - BMC genomics, 2017 - Springer
Advancing the production efficiency and profitability of aquaculture is dependent upon the
ability to utilize a diverse array of genetic resources. The ultimate goals of aquaculture …

Transgenerational responses of molluscs and echinoderms to changing ocean conditions

PM Ross, L Parker, M Byrne - ICES Journal of Marine Science, 2016 - academic.oup.com
We are beginning to understand how the larvae of molluscs and echinoderms with complex
life cycles will be affected by climate change. Early experiments using short-term exposures …

Persistence of Positive Carryover Effects in the Oyster, Saccostrea glomerata, following Transgenerational Exposure to Ocean Acidification

LM Parker, WA O'Connor, DA Raftos, HO Pörtner… - PloS one, 2015 - journals.plos.org
Ocean acidification (OA) is predicted to have widespread implications for marine organisms,
yet the capacity for species to acclimate or adapt over this century remains unknown. Recent …

Transposons, genome size, and evolutionary insights in animals

A Canapa, M Barucca, MA Biscotti, M Forconi… - … and genome research, 2016 - karger.com
The relationship between genome size and the percentage of transposons in 161 animal
species evidenced that variations in genome size are linked to the amplification or the …

Sequence determinants, function, and evolution of CpG islands

A Angeloni, O Bogdanovic - Biochemical Society Transactions, 2021 - portlandpress.com
In vertebrates, cytosine-guanine (CpG) dinucleotides are predominantly methylated, with∼
80% of all CpG sites containing 5-methylcytosine (5mC), a repressive mark associated with …

DNA methylation changes in response to ocean acidification at the time of larval metamorphosis in the edible oyster, Crassostrea hongkongensis

YK Lim, K Cheung, X Dang, SB Roberts, X Wang… - Marine environmental …, 2021 - Elsevier
Unprecedented rate of increased CO 2 level in the ocean and the subsequent changes in
carbonate system including decreased pH, known as ocean acidification (OA), is predicted …

DNA methylation differences between male and female gonads of the oyster reveal the role of epigenetics in sex determination

D Sun, Q Li, H Yu - Gene, 2022 - Elsevier
DNA methylation involved in sex determination mechanism by regulating gene expression
related to sex determination networks are common in vertebrates. However, the mechanism …

Population epigenetic divergence exceeds genetic divergence in the Eastern oyster Crassostrea virginica in the Northern Gulf of Mexico

KM Johnson, MW Kelly - Evolutionary Applications, 2020 - Wiley Online Library
Populations may respond to environmental heterogeneity via evolutionary divergence or
phenotypic plasticity. While evolutionary divergence occurs through DNA sequence …

Genome-wide DNA methylation analysis reveals a conserved epigenetic response to seasonal environmental variation in the staghorn coral Acropora cervicornis

JA Rodríguez-Casariego… - Frontiers in Marine …, 2020 - frontiersin.org
Epigenetic modifications such as DNA methylation have been shown to participate in plastic
responses to environmental change in a wide range of organisms, including scleractinian …

Dynamics of DNA methylomes underlie oyster development

G Riviere, Y He, S Tecchio, E Crowell, M Gras… - PLoS …, 2017 - journals.plos.org
DNA methylation is a critical epigenetic regulator of development in mammals and social
insects, but its significance in development outside these groups is not understood. Here we …