DNA methylation and regulation of gene expression: Guardian of our health
GA Dhar, S Saha, P Mitra, R Nag Chaudhuri - The Nucleus, 2021 - Springer
One of the most critical epigenetic signatures present in the genome of higher eukaryotes is
the methylation of DNA at the C-5 position of the cytosine ring. Based on the sites of DNA …
the methylation of DNA at the C-5 position of the cytosine ring. Based on the sites of DNA …
Recent advances in diabetic kidney diseases: from kidney injury to kidney fibrosis
PH Hung, YC Hsu, TH Chen, CL Lin - International Journal of Molecular …, 2021 - mdpi.com
Diabetic kidney disease (DKD) is the leading cause of chronic kidney disease and end-
stage renal disease. The natural history of DKD includes glomerular hyperfiltration …
stage renal disease. The natural history of DKD includes glomerular hyperfiltration …
DNA G-quadruplex structures mold the DNA methylome
Control of DNA methylation level is critical for gene regulation, and the factors that govern
hypomethylation at CpG islands (CGIs) are still being uncovered. Here, we provide evidence …
hypomethylation at CpG islands (CGIs) are still being uncovered. Here, we provide evidence …
Comparative analysis of genome-scale, base-resolution DNA methylation profiles across 580 animal species
J Klughammer, D Romanovskaia, A Nemc… - Nature …, 2023 - nature.com
Methylation of cytosines is a prototypic epigenetic modification of the DNA. It has been
implicated in various regulatory mechanisms across the animal kingdom and particularly in …
implicated in various regulatory mechanisms across the animal kingdom and particularly in …
Targeting HIF-2α in the tumor microenvironment: redefining the role of HIF-2α for solid cancer therapy
Simple Summary Hypoxia is defined as the inadequate supply of oxygen in tissues. Regions
of acute and chronic hypoxia are a universal feature of the tumor microenvironment and a …
of acute and chronic hypoxia are a universal feature of the tumor microenvironment and a …
The trinity of cGAS, TLR9, and ALRs guardians of the cellular galaxy against host-derived self-DNA
V Kumar - Frontiers in Immunology, 2021 - frontiersin.org
The immune system has evolved to protect the host from the pathogens and allergens
surrounding their environment. The immune system develops in such a way to recognize …
surrounding their environment. The immune system develops in such a way to recognize …
Integrative proteomic profiling reveals PRC2-dependent epigenetic crosstalk maintains ground-state pluripotency
G van Mierlo, RAM Dirks, L De Clerck, AB Brinkman… - Cell stem cell, 2019 - cell.com
The pluripotent ground state is defined as a basal state free of epigenetic restrictions, which
influence lineage specification. While naive embryonic stem cells (ESCs) can be maintained …
influence lineage specification. While naive embryonic stem cells (ESCs) can be maintained …
Sequence determinants, function, and evolution of CpG islands
A Angeloni, O Bogdanovic - Biochemical Society Transactions, 2021 - portlandpress.com
In vertebrates, cytosine-guanine (CpG) dinucleotides are predominantly methylated, with∼
80% of all CpG sites containing 5-methylcytosine (5mC), a repressive mark associated with …
80% of all CpG sites containing 5-methylcytosine (5mC), a repressive mark associated with …
Enhancer-gene specificity in development and disease
T Pachano, E Haro, A Rada-Iglesias - Development, 2022 - journals.biologists.com
Enhancers control the establishment of spatiotemporal gene expression patterns throughout
development. Over the past decade, the development of new technologies has improved our …
development. Over the past decade, the development of new technologies has improved our …
Molecular processes connecting DNA methylation patterns with DNA methyltransferases and histone modifications in mammalian genomes
A Jeltsch, J Broche, P Bashtrykov - Genes, 2018 - mdpi.com
DNA methylation is an essential part of the epigenome chromatin modification network,
which also comprises several covalent histone protein post-translational modifications. All …
which also comprises several covalent histone protein post-translational modifications. All …