Epigenetic mechanisms that underpin metabolic and cardiovascular diseases
PD Gluckman, MA Hanson, T Buklijas… - Nature Reviews …, 2009 - nature.com
Cellular commitment to a specific lineage is controlled by differential silencing of genes,
which in turn depends on epigenetic processes such as DNA methylation and histone …
which in turn depends on epigenetic processes such as DNA methylation and histone …
[HTML][HTML] DNA methylation: conducting the orchestra from exposure to phenotype?
FAD Leenen, CP Muller, JD Turner - Clinical epigenetics, 2016 - Springer
Abstract DNA methylation, through 5-methyl-and 5-hydroxymethylcytosine (5mC and 5hmC),
is considered to be one of the principal interfaces between the genome and our …
is considered to be one of the principal interfaces between the genome and our …
g: Profiler—a web server for functional interpretation of gene lists (2011 update)
Functional interpretation of candidate gene lists is an essential task in modern biomedical
research. Here, we present the 2011 update of g: Profiler (http://biit. cs. ut. ee/gprofiler/), a …
research. Here, we present the 2011 update of g: Profiler (http://biit. cs. ut. ee/gprofiler/), a …
The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets
JW Nicol, GA Helt, SG Blanchard Jr, A Raja… - …, 2009 - academic.oup.com
Experimental techniques that survey an entire genome demand flexible, highly interactive
visualization tools that can display new data alongside foundation datasets, such as …
visualization tools that can display new data alongside foundation datasets, such as …
[HTML][HTML] Identification and systematic annotation of tissue-specific differentially methylated regions using the Illumina 450k array
Background DNA methylation has been recognized as a key mechanism in cell
differentiation. Various studies have compared tissues to characterize epigenetically …
differentiation. Various studies have compared tissues to characterize epigenetically …
[HTML][HTML] Characterization of tissue-specific differential DNA methylation suggests distinct modes of positive and negative gene expression regulation
Background DNA methylation plays an important role in regulating gene expression during
many biological processes. However, the mechanism of DNA-methylation-dependent gene …
many biological processes. However, the mechanism of DNA-methylation-dependent gene …
Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver
AL Brunner, DS Johnson, SW Kim, A Valouev… - Genome …, 2009 - genome.cshlp.org
To investigate the role of DNA methylation during human development, we developed
Methyl-seq, a method that assays DNA methylation at more than 90,000 regions throughout …
Methyl-seq, a method that assays DNA methylation at more than 90,000 regions throughout …
DNA methylation status predicts cell type‐specific enhancer activity
M Wiench, S John, S Baek, TA Johnson… - The EMBO …, 2011 - embopress.org
Cell‐selective glucocorticoid receptor (GR) binding to distal regulatory elements is
associated with cell type‐specific regions of locally accessible chromatin. These regions can …
associated with cell type‐specific regions of locally accessible chromatin. These regions can …
Tissue‐specific dysregulation of DNA methylation in aging
The normal aging process is a complex phenomenon associated with physiological
alterations in the function of cells and organs over time. Although an attractive candidate for …
alterations in the function of cells and organs over time. Although an attractive candidate for …
[PDF][PDF] Structure of the Dnmt1 reader module complexed with a unique two-mono-ubiquitin mark on histone H3 reveals the basis for DNA methylation maintenance
S Ishiyama, A Nishiyama, Y Saeki, K Moritsugu… - Molecular cell, 2017 - cell.com
The proper location and timing of Dnmt1 activation are essential for DNA methylation
maintenance. We demonstrate here that Dnmt1 utilizes two-mono-ubiquitylated histone H3 …
maintenance. We demonstrate here that Dnmt1 utilizes two-mono-ubiquitylated histone H3 …