Epigenetic regulation of drug processing genes

CD Klaassen, H Lu, JY Cui - Toxicology Mechanisms and Methods, 2011 - Taylor & Francis
Drug processing genes (DPGs), namely uptake transporters, phase-I and phase-II enzymes,
as well as efflux transporters are responsible for the absorption, distribution, metabolism …

DNA methylation profiling in recurrent miscarriage

L Pi, Z Zhang, Y Gu, X Wang, J Wang, J Xu, J Liu… - PeerJ, 2020 - peerj.com
Recurrent miscarriage (RM) is a complex clinical problem. However, specific diagnostic
biomarkers and candidate regulatory targets have not yet been identified. To explore RM …

DNA methylation and histone modification profiles of mouse organic anion transporting polypeptides

S Imai, R Kikuchi, H Kusuhara, Y Sugiyama - Drug Metabolism and …, 2013 - ASPET
Organic anion transporting polypeptides (rodents, Oatps; human, OATPs) are primarily
involved in the transmembrane transportation of a wide range of endogenous and …

Methylation is maintained specifically at imprinting control regions but not other DMRs associated with imprinted genes in mice bearing a mutation in the Dnmt1 …

S Regmi, L Giha, A Ali, C Siebels-Lindquist… - Frontiers in Cell and …, 2023 - frontiersin.org
Differential methylation of imprinting control regions in mammals is essential for
distinguishing the parental alleles from each other and regulating their expression …

Novel sex-dependent differentially methylated regions are demethylated in adult male mouse livers

S Ito, K Hirabayashi, K Moriishi, Y Matsui… - Biochemical and …, 2015 - Elsevier
In mammalian livers, sexual dimorphisms are observed in tissue-specific functions and
diseases such as hepatocellular carcinoma. We identified sex-dependent differentially …

Quantitative epigenetic co-variation in CpG islands and co-regulation of developmental genes

H Liu, Y Chen, J Lv, H Liu, R Zhu, J Su, X Liu… - Scientific Reports, 2013 - nature.com
The genome-wide variation of multiple epigenetic modifications in CpG islands (CGIs) and
the interactions between them are of great interest. Here, we optimized an entropy-based …

Promoter Methylation and Tissue-Specific Transcription of the α7 Nicotinic Receptor Gene, CHRNA7

A Canastar, J Logel, S Graw, J Finlay-Schultz… - Journal of Molecular …, 2012 - Springer
The α7 nicotinic acetylcholine receptor is known to regulate a wide variety of developmental
and secretory functions in neural and non-neural tissues. The mechanisms that regulate its …

Metrics for evaluating differentially methylated region sets predicted from BS-seq data

X Peng, H Luo, X Kong, J Wang - Briefings in Bioinformatics, 2022 - academic.oup.com
Investigating differentially methylated regions (DMRs) presented in different tissues or cell
types can help to reveal the mechanisms behind the tissue-specific gene expression. The …

Core promoter analysis of porcine Six1 gene and its regulation of the promoter activity by CpG methylation

W Wu, Z Ren, H Liu, L Wang, R Huang, J Chen… - Gene, 2013 - Elsevier
Six1, an evolutionary conserved transcription factor, has been shown to play an important
role in organogenesis and diseases. However, no reports were shown to investigate its …

[HTML][HTML] Genome-wide analysis of epigenetic signatures for kidney-specific transporters

R Kikuchi, S Yagi, H Kusuhara, S Imai, Y Sugiyama… - Kidney international, 2010 - Elsevier
DNA methylation-dependent gene silencing is one of the most characterized mechanisms in
epigenetic regulation of gene expression. This process is thought to influence the ability of …