Measuring biological aging in humans: A quest

L Ferrucci, M Gonzalez‐Freire, E Fabbri… - Aging cell, 2020 - Wiley Online Library
The global population of individuals over the age of 65 is growing at an unprecedented rate
and is expected to reach 1.6 billion by 2050. Most older individuals are affected by multiple …

Regulation of transposable elements by DNA modifications

Ö Deniz, JM Frost, MR Branco - Nature Reviews Genetics, 2019 - nature.com
Maintenance of genome stability requires control over the expression of transposable
elements (TEs), whose activity can have substantial deleterious effects on the host …

CpG and non-CpG methylation in epigenetic gene regulation and brain function

HS Jang, WJ Shin, JE Lee, JT Do - Genes, 2017 - mdpi.com
DNA methylation is a major epigenetic mark with important roles in genetic regulation.
Methylated cytosines are found primarily at CpG dinucleotides, but are also found at non …

DNA methylation and its basic function

LD Moore, T Le, G Fan - Neuropsychopharmacology, 2013 - nature.com
In the mammalian genome, DNA methylation is an epigenetic mechanism involving the
transfer of a methyl group onto the C5 position of the cytosine to form 5-methylcytosine. DNA …

[HTML][HTML] Reversing DNA methylation: mechanisms, genomics, and biological functions

H Wu, Y Zhang - Cell, 2014 - cell.com
Methylation of cytosines in the mammalian genome represents a key epigenetic modification
and is dynamically regulated during development. Compelling evidence now suggests that …

DNA methylation methods: Global DNA methylation and methylomic analyses

S Li, TO Tollefsbol - Methods, 2021 - Elsevier
DNA methylation provides a pivotal layer of epigenetic regulation in eukaryotes that has
significant involvement for numerous biological processes in health and disease. The …

TETonic shift: biological roles of TET proteins in DNA demethylation and transcription

WA Pastor, L Aravind, A Rao - Nature reviews Molecular cell biology, 2013 - nature.com
In many organisms, the methylation of cytosine in DNA has a key role in silencing'parasitic'
DNA elements, regulating transcription and establishing cellular identity. The recent …

Dynamic readers for 5-(hydroxy) methylcytosine and its oxidized derivatives

CG Spruijt, F Gnerlich, AH Smits, T Pfaffeneder… - Cell, 2013 - cell.com
Tet proteins oxidize 5-methylcytosine (mC) to generate 5-hydroxymethyl (hmC), 5-formyl
(fC), and 5-carboxylcytosine (caC). The exact function of these oxidative cytosine bases …

[HTML][HTML] MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system

M Mellén, P Ayata, S Dewell, S Kriaucionis, N Heintz - Cell, 2012 - cell.com
The high level of 5-hydroxymethylcytosine (5hmC) present in neuronal genomes suggests
that mechanisms interpreting 5hmC in the CNS may differ from those present in embryonic …

Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome

M Yu, GC Hon, KE Szulwach, CX Song, L Zhang, A Kim… - Cell, 2012 - cell.com
Summary The study of 5-hydroxylmethylcytosines (5hmC) has been hampered by the lack of
a method to map it at single-base resolution on a genome-wide scale. Affinity purification …