Epigenetic control of gene regulation during development and disease: A view from the retina

X Corso-Díaz, C Jaeger, V Chaitankar… - Progress in retinal and …, 2018 - Elsevier
Complex biological processes, such as organogenesis and homeostasis, are stringently
regulated by genetic programs that are fine-tuned by epigenetic factors to establish cell fates …

DNA methylation in diabetic retinopathy: pathogenetic role and potential therapeutic targets

C Cai, C Meng, S He, C Gu, T Lhamo, D Draga, D Luo… - Cell & Bioscience, 2022 - Springer
Background Diabetic retinopathy (DR), a specific neuron-vascular complication of diabetes,
is a major cause of vision loss among middle-aged people worldwide, and the number of …

Epigenomic landscapes of retinal rods and cones

A Mo, C Luo, FP Davis, EA Mukamel, GL Henry… - Elife, 2016 - elifesciences.org
Rod and cone photoreceptors are highly similar in many respects but they have important
functional and molecular differences. Here, we investigate genome-wide patterns of DNA …

Focused, high accuracy 5-methylcytosine quantitation with base resolution by benchtop next-generation sequencing

DR Masser, AS Berg, WM Freeman - Epigenetics & chromatin, 2013 - Springer
Background The growing interest in the role of epigenetic modifications in human health and
disease has led to the development of next-generation sequencing methods for whole …

Exposure to crude oil induces retinal apoptosis and impairs visual function in fish

JT Magnuson, NM Bautista, JA Lucero… - … science & technology, 2020 - ACS Publications
Polycyclic aromatic hydrocarbons (PAHs) present in crude oil are known to impair visual
development in fish. However, the underlying mechanism of PAH-induced toxicity to the …

[HTML][HTML] Tet-mediated DNA hydroxymethylation regulates retinal neurogenesis by modulating cell-extrinsic signaling pathways

P Seritrakul, JM Gross - PLoS Genetics, 2017 - journals.plos.org
DNA hydroxymethylation has recently been shown to play critical roles in regulating gene
expression and terminal differentiation events in a variety of developmental contexts …

Conditional knockdown of DNA methyltransferase 1 reveals a key role of retinal pigment epithelium integrity in photoreceptor outer segment morphogenesis

IO Nasonkin, SL Merbs, K Lazo, VF Oliver… - …, 2013 - journals.biologists.com
Dysfunction or death of photoreceptors is the primary cause of vision loss in retinal and
macular degenerative diseases. As photoreceptors have an intimate relationship with the …

Epigenetic regulation of retinal development

R Raeisossadati, MFR Ferrari, AH Kihara, I AlDiri… - Epigenetics & …, 2021 - Springer
In the developing vertebrate retina, retinal progenitor cells (RPCs) proliferate and give rise to
terminally differentiated neurons with exquisite spatio-temporal precision. Lineage …

Dnmt1-dependent DNA methylation is essential for photoreceptor terminal differentiation and retinal neuron survival

KD Rhee, J Yu, CY Zhao, G Fan, XJ Yang - Cell death & disease, 2012 - nature.com
Epigenetic regulation of the genome is critical for the emergence of diverse cell lineages
during development. To understand the role of DNA methylation during retinal network …

Benchmarking of methods for DNA methylome deconvolution

K De Ridder, H Che, K Leroy, B Thienpont - Nature Communications, 2024 - nature.com
Defining the number and abundance of different cell types in tissues is important for
understanding disease mechanisms as well as for diagnostic and prognostic purposes …